Arachis duranensis: 107485674
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Entry
107485674 CDS
T04300
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107485674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107485674
03036 Chromosome and associated proteins [BR:
adu03036
]
107485674
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107485674
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107485674
mRNA degradation factors
5'-3' decay
Decapping complex
107485674
Chromosome and associated proteins [BR:
adu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107485674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
PRP1_N
CMS1
TFIIA
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
107485674
NCBI-ProteinID:
XP_015961689
UniProt:
A0A6P4DA42
LinkDB
All DBs
Position
4:complement(107928861..107934370)
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AA seq
506 aa
AA seq
DB search
MNNNRARYPPGIGLGRGNGGFNTGFQPRPPQQQYVQRHMVQQQHPQHYQHYQQNQQQHQQ
QQQQQQQQQQQWLRRTQLGGGGSNDNNVVEEVEKTVQSEAVDSSSQDWKARLKVPPPDTR
YKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT
GKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSL
KDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQ
FLPPTRQILMFSATFPVTVKDFKDRYLRKPYIINLMDELTLKGITQYYAFVEERQKVHCL
NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC
RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN
LYRIEQELGTEIKQIPPHIDQAIYCR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaatagagcgcggtacccacctgggatcggattaggtcgtggaaatggtggt
ttcaacactgggtttcaaccaaggccacctcaacaacagtatgtgcaaaggcacatggtt
cagcagcagcatcctcagcactatcagcactatcagcagaatcagcaacaacatcaacag
cagcagcaacaacaacaacaacagcaacaacaatggttgagaaggacccaattgggtggc
ggtggaagtaatgacaataacgttgttgaggaggttgagaagaccgtacagtctgaagcc
gtggactcaagttcacaagattggaaggcaagattaaaggttccaccgcctgatacacgc
tataagactgaggatgtaacggcaactaaaggaaatgaattcgaggattactttttgaag
cgtgagctgctcatgggaatatatgagaagggttttgagagaccttcaccaatccaagaa
gaaagcattccaattgctcttactggcagtgacattcttgcaagggctaagaatggaaca
ggcaaaacagctgcattttgtattcctgcattggaaaaaattgatcaagataataatgtt
attcaagttgttatattggtcccaaccagagaattggccttgcagacttctcaagtgtgt
aaagaactcggaaaacatttgaaaattcaggttatggtaaccactggtggtaccagccta
aaagatgacattatgcgtttatatcaaccagttcatttgctggttggaactccaggaaga
attttggatcttgcaaagaagggcgtttgtgttttgaaagattgctctatgctagttatg
gatgaggctgataagcttctgtccccggagttccaaccttcaatagagcagctgattcaa
tttcttcctccaacccgtcaaatcctgatgttttctgcaacatttcctgttactgtaaag
gacttcaaagatagatatcttcgaaagccatatatcattaatcttatggatgagctaact
ctgaagggtatcacacagtattatgcatttgtggaagagagacagaaagtccactgccta
aatactcttttctctaagcttcaaataaaccagtcaatcatcttctgtaattcagtgaat
cgggttgaactccttgccaagaaaataacagaacttggatattcttgtttctatattcat
gcaaagatgttgcaagaccaccgtaacagagtatttcacgatttccgcaatggtgcatgc
aggaatcttgtttgtactgatctttttactagaggtatagacatccaagcagtcaacgtt
gttattaactttgattttccgaagaactcagaaacctatctgcacagggttggtcgttca
ggaaggtttggacaccttggtttagcagtaaacttgattacatatgaggatcgcttcaat
ttatataggattgaacaagagcttggcactgaaataaaacaaattccaccacatattgat
caggctatatattgccggtga
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