Arachis duranensis: 107488383
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Entry
107488383 CDS
T04300
Name
(RefSeq) exosome complex component RRP45A isoform X2
KO
K03678
exosome complex component RRP45
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107488383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107488383
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107488383
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107488383
NCBI-ProteinID:
XP_015964614
UniProt:
A0A6P4DC54
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Position
5:complement(16124666..16127892)
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AA seq
364 aa
AA seq
DB search
MEQRLANSWRQTINEKKFIETALLSELRVDGRRPFDYRKLTIKFGKDDGSSEVQLGHTHV
MAIVSAQLLQPYKERPNEGTLAVFTEFSPMADPSFEPGRPRESAVELGRIIDRGLRESRA
VDTESLCVLSGKLVWAVRIDIHILDNGGNLVDAANIAALAALLTFRRPECSLGGEDGQQV
VVHPPEVRDPIPLIIHHLPIAVTFGFFSNENIMVIDPTYHEEAVLTGRMTATVNANGDVC
SIQKAGGEGVYQQVLMHCLKLAHVKAGDITAKIKDAVEIYNTQRALRKIKRHSISVAMDV
CGTPAKSREKQNQLDGSHLDQSKFKDEASSMECDATSSGQEQSNKRDGVSNKFIGGPSSW
TGNS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaggctagcaaattcatggcgccaaaccataaacgagaagaaattcatagag
accgcactcttgtcggagctccgagttgacggtcggcgccccttcgactaccgcaagctc
accatcaagttcggcaaggacgacggctcctcggaggtccagcttggccacactcacgtc
atggccatcgtctccgcccaactgctccagccctacaaggaaaggccaaacgagggcaca
ctcgccgtcttcactgaattctcccccatggccgacccttcctttgaacccggccgccca
agggagtccgccgtcgagttaggccgcattattgaccgcgggttgagggagagccgagcc
gtcgatacagaatcgctctgtgtcctctctgggaagctcgtttgggcggttcgcattgat
atccatattcttgacaatggagggaatcttgttgatgctgctaatattgctgctctggct
gctttgttgacgttccggcggccagaatgctcgttagggggagaagatggtcagcaagtt
gtggtgcatcctcctgaggtgcgcgacccgattcctttgatcatacatcatcttcctata
gctgtgacgtttggatttttcagcaatgaaaatattatggtgatagatccaacataccat
gaagaggctgtactgaccgggcggatgactgctacagtgaatgcaaatggtgatgtttgc
tccattcaaaaggcgggtggggaaggagtatatcagcaagttctcatgcattgcttgaaa
ctagctcatgttaaagctggtgatattacagccaagataaaggatgcagttgaaatatac
aacactcaaagggcactacggaagattaaacgtcattccatttctgttgccatggatgta
tgtggtacccctgccaaatcaagagaaaagcaaaatcaattagatggtagtcatttagac
cagtcaaagtttaaagatgaggcaagttctatggaatgtgatgccacatcatctggacag
gaacaaagtaacaagagagatggagtttctaataaatttattggcgggccttcaagctgg
accggcaactcatag
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