Arachis duranensis: 107488493
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Entry
107488493 CDS
T04300
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
adu
Arachis duranensis
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107488493
03036 Chromosome and associated proteins [BR:
adu03036
]
107488493
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
107488493
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107488493
Chromosome and associated proteins [BR:
adu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
107488493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_16
ATPase_2
AAA_22
Helicase_RecD
DEAD
Mov-10_helical
PhoH
MOV-10_Ig-like
SLFN-g3_helicase
AAA
Bac_DnaA
AAA_7
AAA_24
Motif
Other DBs
NCBI-GeneID:
107488493
NCBI-ProteinID:
XP_015964732
UniProt:
A0A6P4DA16
LinkDB
All DBs
Position
5:complement(18071211..18075767)
Genome browser
AA seq
883 aa
AA seq
DB search
MSTVGYRSDDECSYVGGKGEIGFLDFEEEKSVCSYAAIDDGDPVIISIPFAFVDGKPQSV
FVGDTAVDLITINNTTKEPVQLWTVHIFASNPQNTFTLSLMEPPSANSNSNGDSDEGFLE
SFDLEDRMLQPGEILKVWLSCKTKEMGMYQSIVHFDVGEERIERVVFVLVEDKISKSLAS
KRPYSRQRRKDKFAVDNFVAGSRPAGKTNRAYINRLPKYDIPGDIRHLLESNQIPEAVEG
GLTRKNYASFFKTLVIMEEIQLEEDMKTYDMECVTMRKRPNQFLSMLVPGLAERRPSLVH
GDFIFAKLASENDKNTGRPYQGFIHRVEADEIFLKFDNEFHLRHRDGNLYDVHFTYNRIN
MRRLYQAVEAASGLGSEFLFPSTLARKRFIETTDLIPISGAFNDEQISSIKSIVGCKGAP
PYLIYGPPGTGKTKTIVEAVLQLYKHNKDARILVCAPSNSAADHILEKLLAEKSVEFQEN
EIFRLNASTRPYEDVKPEIIRFCFFDELIFKCPPVSALRHYRIIISTYMSACLLYAEDVS
RGHFSHIFLDEAGQASEPETMIPISHLCRRETVVVLAGDPMQLGPVIYSKKADTHGLGTS
YLARLFQCEMYATGDANYATTLVNNYRCHPEILHLPSKLFYNGALIACRDKTTFMVSPGF
LPNEEFPVLFFGIQGCDEREGNNPSWFNRIEVSKVVEVVKRLTAGGNIMEEHIGIIAPYR
QQVLKIKQTLENQEMPDIKVGSVEQFQGQEKEVIIISTVRSTIKHNEFDRVHCLGFLSNH
RRFNVAVTRAISLLVIIGNPHIICKDNYWSQMLWHCVDNKSYQGCKLPDRPKTYVEDAGD
NNVKPYGEVNGEDSVEWGQDLSQVEIPKPVTDEAEWSDGWRSS
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgttggatacaggtcagatgatgaatgctcttatgttggaggaaagggagaa
atcgggtttctagattttgaggaagagaaatctgtttgtagttacgctgctattgatgat
ggcgatccggttatcatatccatcccatttgcatttgtggatgggaagcctcaatcagtg
tttgttggagatactgctgtggatttaataaccatcaataataccaccaaagagcctgtg
cagttgtggactgttcatatttttgcctcaaatcctcagaacactttcactctttctctg
atggaacctccatcagcaaattcaaattcaaatggagattcagatgagggctttctcgaa
tcatttgatttggaggatagaatgcttcagcctggtgagattttaaaagtatggttgtct
tgcaagacaaaagaaatgggcatgtaccaatcaattgtgcattttgatgttggagaagaa
agaatagaaagggtggtttttgtcttagttgaagacaagatttcgaaatcgttggcttct
aagaggccttattctcgacaaagaagaaaagacaaatttgcagtagataatttcgtcgca
ggctcacgtcctgcagggaaaacaaatcgggcctacattaataggcttccaaaatatgat
attcccggggatattagacacttgcttgagagcaatcagatccctgaagctgttgaaggt
ggtctaacaagaaagaattatgcttcttttttcaaaacattggtgataatggaagaaata
caattagaggaagacatgaagacttatgacatggaatgcgtaacaatgaggaagagaccc
aatcaatttttgtccatgttggttcctgggcttgctgagagaagaccatcactggttcat
ggggatttcatctttgccaaactagcatctgaaaatgataagaacactggacgcccttat
cagggatttatccatcgtgttgaagctgatgagatctttttgaagtttgataatgaattt
cacctgcgccatagagatggaaatctttatgatgttcacttcacctacaataggatcaat
atgagaaggttgtatcaagcagttgaggcagccagtggcttaggatccgagttccttttt
ccatctactttagccaggaagaggttcattgaaaccactgatctgattcccatatctggt
gcttttaatgatgagcagatttcttcaatcaaaagtattgttggttgcaaaggggcgcca
ccatatctgatttatgggcctccaggtacgggaaagactaagacaatagtagaagcagtt
ctccagctctacaaacataataaggatgcccgtattcttgtctgtgcaccatcaaatagt
gcagcagaccacatattagagaaactgcttgctgagaagtctgttgaatttcaagaaaat
gaaatattcaggctcaatgcttctaccaggccatatgaggatgtcaaacctgaaattatc
cgtttctgcttctttgatgagttgatatttaaatgcccgccagtcagtgccctcaggcat
tataggattataatatcaacatatatgagtgcctgtcttctttatgcagaagatgtttca
cggggtcatttctctcacattttcttggatgaggctggccaagcctcagaacctgaaacc
atgatccctatatcccatctctgcagaagggaaactgttgttgttctagctggagaccca
atgcagttgggtccagtaatttattcgaagaaagcagatacacatggattggggacatca
tacctggcacgactgtttcaatgtgagatgtatgcaactggagatgcaaattatgcaacg
acattggttaataattatcgatgccatccagagatattacatctcccttcaaagctgttt
tataatggggcgttgattgcatgcagagacaagacaaccttcatggtgagtcctggcttc
ctccctaatgaggagtttcccgttcttttctttggcatccaaggatgtgatgaaagagaa
gggaataacccctcatggttcaaccgaattgaagtgagcaaagttgtcgaagttgtcaag
aggctgacagctggtgggaatataatggaggaacacattggcataatagcaccatatagg
caacaagtactcaaaattaaacagactcttgaaaatcaagagatgcctgatatcaaagtt
ggtagtgttgaacagtttcaaggacaagagaaggaagttattatcatatcaactgttcga
tcaaccatcaaacacaatgagtttgacagagtccactgtcttggctttttgagcaatcat
agaaggtttaatgtggctgtaactcgtgccatatcattgttggttatcatcgggaatcca
cacattatctgcaaggacaattattggagccaaatgctgtggcactgcgtagacaataaa
tcttatcagggttgtaaacttcctgataggccaaagacttatgttgaggacgctggagac
aacaatgtgaagccttatggagaggtcaatggagaggactctgtagaatggggtcaagat
ttatcccaggtggagattcccaaacctgttactgatgaggctgaatggtctgatggctgg
agaagtagttga
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