Arachis duranensis: 107491140
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Entry
107491140 CDS
T04300
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
adu
Arachis duranensis
Pathway
adu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107491140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107491140
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107491140
U7-dependent histone pre-mRNA processing factors
107491140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
BPS
Motif
Other DBs
NCBI-GeneID:
107491140
NCBI-ProteinID:
XP_015967402
UniProt:
A0A6P4DI46
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Position
5:complement(105017051..105023429)
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AA seq
740 aa
AA seq
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MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSLLHPLSKVAPTIDAVLL
SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQFLSRKQVSEFDLFTLDDID
SAFQSVTKLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRRE
RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPIDTAG
RVLELILILESYWADENLTYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIFL
LKYITLLINKAELDNAPDGPKVVLASMASLETGFSHDIFVEWASDVKNLVLFTERGQYAT
LARMLQADPPPKAVKVTVSKRVPLVGDELIAYEEEQNRIKKEEALKASLMKEEELKASQG
PDNNVSDPMVVDASNDHLSAEAAGPRGGGYRDILIDGFVPPSTSIAPMFPCYENTSEWDD
FGEVINPDDYVIKDEDMDQGAMHAGGDINGKLDEGAASLILDTKPSKVISDERTVQVRCS
LVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEET
IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEIAWVDAEVEKTENEMLALVPVSSQVPPHK
SVLVGDLKLADFKQFLSSKGVQVEFSGGALRCGEYVTLRKVGDTTQKGGSSGTQQIVIEG
PLCEDYYKIREYLYSQFYLL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttcggtgcaggtaacgccactgtgtggagtgtacaacgagaaccctctctcc
tatttggtctccatcgatggcttcaacttcctcgtcgactgtggctggaatgaccatttt
gacccttccctccttcatcccctctccaaggtagcaccaactattgatgctgtgttgctt
tcacatccggatacccttcaccttggtgccctcccatatgccatgaagcagctcggactt
gctgctccggtattttcgactgagcctgtctatagattgggccttctcaccatgtatgac
cagttcctctcaagaaagcaagtatcagagtttgatctgttcacacttgatgatattgat
tctgcattccaaagtgtaacaaagctaacatactctcaaaatcatcatttctcaggcaag
ggagagggaattgtgattgcacctcacgttgctggacatttgttgggaggcactatatgg
aaaattacaaaggatggtgaggatgtgatatatgctgttgattttaatcatcggagggaa
aggcatttgaatggaactgttctaggttcttttgtgagaccagctgttctaataacagat
gcttacaatgctttgaacaatcagccttacagacgtcaaaaggataaagaatttggtgat
atcttaaagaagactctaagggcaggtggcaatgtattacttcctattgacactgctgga
cgggtgttggaacttattttgattttagaatcgtactgggctgacgaaaacttgacctat
cctatatactttctgacttatgttgcatccagcacaatagattatgtgaagagtttcctt
gagtggatgagtgattccatagcaaagtcctttgaacaaactcgtgagaatatatttctt
ctcaagtatatcacacttctgattaacaaggctgagcttgacaatgctccagatggtcca
aaggttgtcctggcatccatggccagcttggaaactggtttttctcatgatatatttgtt
gagtgggccagcgacgtgaaaaatcttgtgctttttactgaaagaggccagtatgcaaca
ctagctcgtatgcttcaggctgatccacctccaaaagccgtcaaagtcactgtgtcaaag
cgggttcctttagttggggacgaactaattgcctatgaagaagagcaaaatagaataaag
aaagaagaagctttaaaagctagtcttatgaaagaagaagaattgaaagcatctcagggg
cctgataataatgttagtgatccaatggttgttgatgctagcaatgatcatctatcagct
gaagctgctggtccacgaggtggaggatacagggacatattaatagatgggtttgttcca
ccttcaacaagcattgccccaatgtttccttgttatgagaatacatcagagtgggatgat
ttcggtgaagtcataaatccagatgattatgtaataaaggatgaagacatggatcaggga
gcaatgcatgcaggaggtgatataaatggaaaactagatgaaggtgctgcaagtttgata
cttgatacaaagccatcaaaagtcatatctgatgaaaggactgtacaagtcagatgttca
ttggtgtatatggacttcgaaggccggtcagatggaagatccattaaaaatattctttcc
catgtggctcccctaaagcttgttttggtgcatggatcagctgaagctacagaacatctg
aagcagcactgcctgaagcatgtttgtcctcacgtctatgctccacaaattgaagagaca
attgatgttacctctgatttatgtgcttacaaggttcaactatctgagaagttgatgagt
aatgtactcttcaaaaagctgggagaatatgaaatagcttgggttgatgctgaagttgag
aaaacagaaaatgaaatgcttgcactagtccctgtctcttcacaagttcctccccataaa
tctgttcttgttggtgatttgaaattggcagatttcaagcagttcctctcaagcaagggt
gttcaggtggaattttctggtggggctttgcgatgtggagaatatgtaactctccgaaaa
gtcggcgatacaactcagaagggcggaagttctggtactcagcaaattgttattgaaggt
cctttgtgcgaggattattataaaattcgtgaatatctttattcacaattttatctgctt
tag
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