Arachis duranensis: 107491719
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Entry
107491719 CDS
T04300
Name
(RefSeq) pre-mRNA-processing factor 39-1 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
adu
Arachis duranensis
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adu03041
]
107491719
Spliceosome [BR:
adu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107491719
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
NRDE-2
TPR_MalT
TPR_12
UTP6_C
TPR_11
TPR_16
TPR_10
Motif
Other DBs
NCBI-GeneID:
107491719
NCBI-ProteinID:
XP_015968115
UniProt:
A0A6P4DGW4
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All DBs
Position
6:complement(837857..845816)
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AA seq
821 aa
AA seq
DB search
MGDSETVVAEALAAETHAAAGFGDSASNPTQEAASTVAEPAAEAATQANSAYALGYSNTG
DGNAYAGDPNAMQPEAQTNSMEDSKQGTEAPSGLGNAATGSSQVNGGPVGAIADATGLEN
GNALGNTDGSADEKQLADGYAAMSAEEDRLWNIVRANSSDFTAWTSLIEETEKVAEDNIL
KIRRVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCIF
AISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLANIYTRILENPN
QQLDRYFNSFKELAANRPLSELQTADEAAVVAGAASEAADQTVEGEVRPDGAENSPKPVS
AGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLD
FIEREGDLSKIVKLYERCVIACANYPEYWIRYILCMEASGSMDLANNVLARATQVFVKRQ
PEIHLFSARFKEQSGDIAGARAAYQLVHTEISPGLLEAIIKHANMEHRLGKLEDAFSLYE
QAIAIEKGKEHSQTLPMLFAQFSRFVYLASGNAEKARQILVEGVENVMMSKPLLEALLHF
EAIQPPPKRVDMNYLESLVVKFIMPNPESPGVVSAAEREELSSIFLEFLNLFGDVQSIKR
CEDRHAKLFLPHRSMSELKKRHAEDFLASDKAKMARSYSVPSAAQSAVGAYPNAQNQWAN
YGVQPQAWPPATQAQQWPAGYTQPASYGAYAGYGANYPNSQVPASVPQNTAYGAYPAAYP
VQPAVPQQSYAQPAAAVASAAAVAPAQQPAAVPQAYYGSYY
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagtgaaacagtagttgccgaagcacttgcagctgagacacatgctgctgct
gggtttggtgactctgcctcgaaccctactcaggaagcagcttctactgttgctgagcct
gctgcagaggctgctactcaagccaattcagcttatgccttaggttattcgaatactggc
gacgggaatgcttatgctggggatcctaatgctatgcaaccagaagcccaaaccaattca
atggaggattccaagcaaggtactgaagctccaagtgggcttggaaatgcagctacaggc
tcaagtcaagtaaatggtggtccagtgggtgcaatagcagatgcaacaggacttgaaaat
gggaatgcattagggaacactgatggatcggctgatgagaaacagcttgcggatggttat
gctgccatgtctgctgaagaagatcgactgtggaatattgtaagagctaattcttcagat
tttacggcttggacttccttgatcgaagagacagagaaggtggccgaggataacattctg
aagattcgaagagtttatgatgcttttctagctgagtttcccttatgttatggttattgg
aagaaatatgctgatcatgaggcacggcttggctctgtcgataaagttgttgaagtttat
gaacgtgctgttcaaggtgttacctattcagtggacatgtggttgcattattgcatattt
gctataagcacgtatggggatccagacactgtgcgtaggctttttgaacgaggattagct
tatgttggaacagattatctttcttttcctctttgggacaagtacattgaatatgagtac
atgcagcaagactgggcccgtcttgccaatatctacactagaatattagagaatccaaat
cagcaactggatcgatatttcaacagcttcaaggagttagctgcaaatcgacctctttca
gagctacaaactgctgatgaagctgctgtagtggcaggtgctgcttcagaggctgctgac
caaactgttgagggagaggttcgtcctgatggtgcagaaaattctcctaaacctgtaagt
gctggattaacagaagcagaagagttggagaagtatatcgccattagagaagagatgtat
aagaaagctaaagagttcgattctaagatcattggttttgaaacagctatcaggaggcca
tactttcatgtacggccactcaatgttggagagcttgaaaattggcataattatctggat
tttatagagagggaaggtgacttaagcaagattgtcaagttatatgagaggtgtgtcatt
gcatgtgccaattaccctgagtactggatacgctatattttgtgtatggaagccagtgga
agtatggatcttgcaaataatgtgcttgctcgggcaacccaagtctttgtcaagaggcaa
cctgaaatacatcttttttctgctcggtttaaggagcagtctggagatatagctggtgct
agagctgcctatcaacttgttcatactgaaatttctcctggtcttcttgaagcaataatc
aagcacgcgaatatggaacatcgactgggaaagttggaggatgccttctctttgtatgaa
caagccattgccattgaaaagggaaaagaacattcccaaacattgccgatgctgtttgct
caattttctcgatttgtctatttggcttctgggaatgcagaaaaggcaagacagattcta
gttgaaggggttgagaatgttatgatgtcgaaaccgctacttgaggctttattgcatttt
gaggctattcagcccccaccaaagcgagttgatatgaactatttggagtcattggtagtc
aaatttataatgcctaaccctgagagtcctggtgttgtaagtgcagctgagcgggaggaa
ctttctagcatttttttggagtttttgaatctctttggagatgtccaatctatcaagagg
tgtgaggataggcatgccaaattgttcttgccacacaggagcatgtcagagttaaaaaaa
cgtcatgctgaggactttttagcttcagataaagcaaaaatggcaagatcttattctgtt
ccatcagctgcccaatctgcagtgggtgcatatccaaatgcacagaatcagtgggctaat
tatggtgtacaacctcaagcttggccaccagccacacaggcacaacagtggcctgctggc
tacactcagccggcttcatatggggcttatgctggatatggagctaactatccaaattct
caggtgcctgcatcagttccacaaaatactgcttatggagcctatccagcagcatatccg
gtacagccggccgttccccagcaaagttatgcacaacctgcagcggctgtggcttctgca
gcggctgtggctcctgctcagcaacctgctgcagttcctcaagcctattacgggagttat
tactga
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