Arachis duranensis: 107492388
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Entry
107492388 CDS
T04300
Name
(RefSeq) DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
adu
Arachis duranensis
Pathway
adu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107492388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adu03400
]
107492388
DNA repair and recombination proteins [BR:
adu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107492388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Tudor_KDM3B
Agenet
LBR_tudor
Motif
Other DBs
NCBI-GeneID:
107492388
NCBI-ProteinID:
XP_015968898
UniProt:
A0A6P4DLT9
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Position
6:7411651..7419318
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AA seq
1280 aa
AA seq
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MRRNTNGRSPLVNQQRQITAFFSKSTSSSPSPSPILSDSKSISNNKTSKLNPNPSPTPPT
PSPSNPKPILLVGASSPLYSDDVIGKRIKVYWPLDKAWYEGTVKSFDNATSKHLVLYDDD
EEESLDLSKEKFEWVQDSSSSVKKLKRLRRSCDIPIVRKMVIDDDESDGSPKGVDDGNCG
SDDSDEDWGKNAVDEGAEEEDDVELDNEEDDYEDAAAERSKRKSSAKVEPKKRKMSGTEK
PEPAKKSKNVEEAGGVKGAFKFSVLEPSSTSDTKKISNGVDNVAIDDASERFATRDAQKF
RFLREDRRDAKRRRPTDENYDPRTLYLPPDFLRSLSDGQKQWWEFKSKHMDKVLFFKMGK
FYELFEMDAHVGVKELDLQYMKGEQPHCGFPERNFSMNVEKLFQGYRVLVIEQTETPVQL
ELRRKNGSKDKVVRREICAVVTKGTLTDGELLSANPEAAYLMALTEQHENNANEVSERIY
GLCIVDVATSRIILGQFKDDLECSALCCILSEIRPVEIVKPAEVLSAETERVLLKHTRNP
LVNELVPNVEFWDAEKTVDQLKRIYRHTDEVSLEDNELGCLPDVLLELVKTVNDNKSALS
ALGGALYYLKQAFLDEALLRFAHFELLPCSGFCDLASKPYMVLDAAALENLEIFENSRNG
DSSGTLYSQLNHCVTAFGKRLLRAWLARPLCHIELIKERQEAITSLKGVNLPYALEFRKA
LSRLPDMERLLARIFSTSEANGRNANKVVLYEDAAKKQLQEFISALRGCELMLQACSSLG
VILNDVKSRLLHHLLTPGKVLPDVCLALNHFKDAFDWVEANNSGRVIPHEGVDPEYDSAC
KAVKEIESSLSKHLIEQRKLLGDTSITYVTVGKDTYLLEVPENFRGKVPRDYELRSSKKG
FFRYWTPAIKKFLGELSQAESEKESLLKSTLQRLIGRFCENHTKWRQLVSTTAELDVLIS
LAIARDYYEGPTCRPSFLSMLSTKDSPYLSAKSLGHPVLRSDSLGKGAFVPNDISIGGQH
DANFILLTGPNMGGKSTLLRQVCLAVVLAQVGADVPAESFDLSPVDRIFVRMGAKDNIMA
GQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHFVRKVQCRGLF
STHYHRLAIDYYKDPKVSLCHMACQVGSGTIGVDEVTFLYRLTPGACPKSYGVNVARLAG
LPTSVLQKAAAKSKEFEASYGKSRNASLETNSPNQEWVDEMIVVMKMLNKAAANLSYQEG
GCDSSLHELKSRARELMQRC
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcaacaccaacggtcgatcgccgctggtgaatcaacagcgccaaatcactgct
ttcttctccaaatccacttcttcttctccttctccttctcccattctctccgattccaaa
tccatcagcaacaataaaacctctaagctaaaccctaaccctagccctacccctcccacg
ccttccccttctaatcccaaacccattcttctcgtcggagcttcttctcctctatactcc
gatgacgtcattggaaaaaggatcaaggtttattggcctcttgataaagcatggtacgaa
ggtaccgtcaaatcgttcgataatgccacttctaagcatttagtgttatacgacgatgac
gaagaggaatcgctcgacctttccaaggagaagttcgaatgggttcaggattcttcatcg
tctgtcaagaagcttaaacggttgcgtcgcagctgcgacatccccattgttaggaagatg
gtgattgacgacgacgagagtgatggaagtcccaaaggtgttgatgatggtaattgtggc
agtgatgattcggatgaagattgggggaagaatgcggtggatgaaggcgccgaggaggaa
gatgacgtggagctagacaacgaggaagatgactatgaagatgctgctgcagagaggtct
aaaagaaagtcaagtgcgaaggtggagcccaagaagcggaaaatgagtggaacagagaaa
ccggagcctgcaaaaaagagcaagaacgtcgaggaagctggtggtgttaagggagctttc
aagttctcagtattggagccttcaagtacttcggatactaaaaagatatccaatggcgtt
gacaatgtggcaattgatgatgcctctgaaagatttgcgacaagggatgctcagaaattt
cgctttctcagagaagaccgcagggatgctaaacgaaggcgtcctactgatgaaaattat
gatccaagaactctctatttgcctcctgatttcttaaggagtttgtcagatggccagaaa
caatggtgggagttcaagtcaaagcatatggacaaagttttatttttcaagatgggtaaa
ttttatgaactttttgagatggatgcacatgtaggagtgaaagagcttgacttgcagtat
atgaagggggaacaacctcattgtggttttccggagaggaatttctcaatgaatgtggag
aaactttttcagggttaccgagttcttgttatagagcagactgaaacacctgtacagtta
gagcttcgtcgcaagaatggctcaaaagataaggttgtgagacgggaaatatgtgcagtg
gttacaaaaggcacactaactgatggggagttgctgtcagcaaacccagaagctgcgtat
ttgatggcactgacagagcaacatgaaaacaacgcaaatgaagtttcagagcgcatttat
ggactttgtatagtcgatgttgccacaagcagaatcattcttggacagtttaaggatgac
ttggaatgcagtgctttatgctgcatcttgtctgagattaggccagttgaaattgtgaaa
cctgctgaagtgctcagtgctgaaacagagagagtactgctgaagcatactagaaatcct
ctagtgaatgaattagttcctaatgtggagttttgggatgctgaaaaaaccgtggatcaa
ttgaagagaatttacaggcacactgatgaagttagtctagaagataatgagctaggttgc
ttgccagatgttttgctggagctggtgaaaactgtcaatgacaataaaagtgcactttca
gctcttgggggtgctctatattatctgaaacaggctttcttagatgaggcattgcttaga
tttgcacactttgagttacttccatgttctggcttctgtgatcttgcctcaaaaccatac
atggttcttgatgcagcagccttggagaatcttgaaatttttgagaatagcagaaatgga
gattcttcaggtactctgtattcccaattaaaccattgtgttaccgcatttggaaagaga
ctactaagggcatggcttgcaagaccattatgtcatatagagttaattaaggagcgccag
gaagccattactagtttaaagggagttaatttaccttatgcactagaatttcgaaaagct
ttgtcaaggttacctgacatggagcgattgctggcccgcatcttctccactagtgaagct
aatggaaggaatgctaataaagtggttctgtatgaggatgcagcaaagaaacaactacaa
gagtttatttctgctcttcgtggttgtgaactaatgttgcaagcatgctcttctcttggc
gttattctgaatgatgtcaaatctagactactccatcatctgttaacacctggaaaagtt
cttcctgatgtctgcttggctctgaaccatttcaaggatgcctttgattgggtggaagcc
aataattcaggccgtgtaatacctcatgaaggagttgaccctgagtatgactcagcctgt
aaggcagttaaagaaattgagtcgagtttatcaaaacatcttattgaacaaaggaaattg
cttggagacacatctatcacttatgtcactgttggaaaggacacataccttttagaagtc
ccagaaaattttcgtgggaaagttcctcgggactatgagctgcgttcatctaaaaaaggc
ttctttaggtactggactcctgctattaaaaagttcctgggagaactctcccaagctgaa
tctgaaaaggagtccttattgaaaagtacattgcagagattaattggacgcttttgtgaa
aatcatactaagtggaggcaattggtgtctactacagctgagctggatgttttgatcagt
ttagctattgctcgtgattactatgaagggccaacatgcagaccaagttttttaagcatg
ctatctaccaaagacagtccttacctctctgctaaaagtttgggacacccagtccttagg
agtgattccttaggaaagggggcctttgtacccaatgacatatcaattggtggtcaacac
gatgccaactttattcttctaactggtcctaacatgggtggaaagtcaactctccttcgc
caagtttgcttggcggtggttttggcccaggtaggggctgatgtcccagcagagagtttt
gatttgtcacctgtggaccgtatctttgttcgcatgggtgccaaagataatatcatggct
ggccagagtacatttttaactgagctttcagaaactgcaacaatgctgtcttcagccact
cgtaattcattggtggctcttgatgagcttgggcgtgggacctcaacttctgatgggcaa
gccattgcggaatctgttctagaacattttgtgcggaaggttcagtgtcgtggattgttt
tctacacattatcatcgattagctatcgattattacaaagatcccaaggtctccctctgc
catatggcatgccaagttggtagtggaacaattggcgtggatgaagtcacctttctttat
aggctgacccctggtgcatgtcccaagagctatggtgttaatgttgcacggttggcaggg
cttccaacttccgtgcttcagaaggctgctgctaagtccaaagaatttgaggcctcttat
ggtaaatctagaaatgcgtctcttgaaacaaactctccaaatcaggaatgggttgatgag
atgatagttgtaatgaaaatgttgaacaaggctgctgcaaatttgagttatcaggaaggt
ggttgtgacagctccctccatgaacttaagagtagagcaagagaacttatgcagcgatgt
taa
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