Arachis duranensis: 107492791
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Entry
107492791 CDS
T04300
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH12-like
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
adu
Arachis duranensis
Pathway
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107492791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adu03041
]
107492791
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107492791
Spliceosome [BR:
adu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107492791
Complex C
U5 SnRNP specific factors
107492791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
AAA_11
Motif
Other DBs
NCBI-GeneID:
107492791
NCBI-ProteinID:
XP_052118908
UniProt:
A0A9C6WWP4
LinkDB
All DBs
Position
6:11486423..11556111
Genome browser
AA seq
2087 aa
AA seq
DB search
ISPRPKSKRRRLQEESVLTATEEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAA
DEILAVLKNDAVKNPDKKKEIEKLLNPIPNQVFDQLVSIGKLITDFQEGSDAANGTSAMD
GDDGLDDDVGVAVEFEENEDDDDESDLDQVQEEEEDEDDVAEPNGTGGMQMGGGIDDEDM
EDANEGMSLNVQDIDAYWLQRKISQAFEQQIDPQQCQKLAEEVLKILAEGDDREVENKLL
IHLEFDKFSLIKFLLRNRLKIVWCTKLARAQDQAEREKIEEEMKGTDLQPILEQLHATRA
SAKERQKNLEKSIREEARRLRGDTGGDGDRDRAKSRRGLADRDSESGWLKGQRQMLDLDN
LAFAQGGLFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLKENEKLVKISSMPDWAQP
AFKGMTQLNRVQSQVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIALPRNPDDGSTD
HSAYKIVYVAPMKALVAEVVGNLSNRLQSYDVKVRELSGDQSLTRQQIEETQIIVTTPEK
WDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVLESIVARTQRQIATTGEYIRLVGLS
ATLPNYEDVAQFLGVELEKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKV
MAVAGKHQVLIFVHSRIETAKTAKAIRDTALAKDTLGRFLKEDSASREILHTHTDLVKSN
DLKDLLPYGFAIHHAGLTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQ
IYNPDKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTSHSELQYYLSLMNQQLPIESQ
FVSKLADQLNAEIVLGTVQNAREACDWLAQTYLYVRMRRNPSLYGLEPDVLTRDIRLEER
RADLIHTAAAILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGNI
ELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSVKINVLLQTYISQLKL
EGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWSVQTPLRQF
NGIPGDVLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRMLHKYIHQFPKLNLAAHVQP
ITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHENFMLKKQFIDEDHTL
NFTVPIYEPLPPQYFIHVVSDRWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTAL
RNPKYEALYQDFKHFNPIQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKGPD
SVMRVVYIAPIEALAKERYHDWEKKFGKDGLELKVVQLTGETATDLKLLEKGQIIISTPE
KWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVAL
STSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTSAAI
VQHAKNAKPALVFVPTRKHVHTTAVDLITYSGADSTEKPFLLRSPEELKPFLDKISDKML
KATLQEGVGYLHEGLNNLDYDIVTQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYY
DGRENAQSDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKEYYKKFLYEAFPVESHLH
HFLHDNLNAEIVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELV
ENTLSDLEASKCILIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVL
SSASEYAQLPIRPGEEEVVRRLINHQRFSFENPRVTDPHIKANALLQAHFSRQFVGGNLA
QDQREVLLSANRLLQAIVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKD
LAKKCQENPGKSIETVFDLLEMDDDERRELLGMPDSQLFDIARFCNRFPNIDLSYEVIDS
DVRAGEDVTIQVTLERDQAEVGPVDAPRYPKSKEEGWWLVVGDTKHNLLLAIKRVSLQRK
LKAKLEFAAPADAGKKSYTLYFMCDSFMGCDQEYAFAIDVKEAGAAD
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atcagcccaagaccaaagagcaagcgccggcgtctccaggaagagagtgtcctcactgcc
actgaggaaggcgtgtatcagcccaagaccaaagagactagggctgcctatgaggccatg
ctgagtgtcattcaacagcagcttggcgggcagcctctcagcattgttagcggcgcggct
gatgagattcttgcagtgctcaagaatgatgctgttaagaatccggacaagaagaaggaa
attgagaagcttttgaatcctattcctaatcaagtgtttgaccagctggtttctattggg
aagcttattacagactttcaggaggggtctgatgctgctaatggtacctcggctatggat
ggcgatgatggccttgatgatgatgttggtgtggcagtggaatttgaggagaacgaggat
gatgatgatgagagtgaccttgatcaggtgcaggaggaggaagaggacgaggatgatgtt
gccgaacctaatggaacaggtggtatgcaaatgggtggtggtattgacgatgaagatatg
gaggatgcaaatgagggaatgagtctcaatgtacaggatatagatgcttattggctgcag
aggaagatttcacaggcgtttgagcagcagattgatccacagcagtgccagaaactcgcc
gaagaggttctaaagattctggctgaaggtgatgacagagaagttgagaacaagctgttg
atccatcttgagtttgataagttcagtctcattaagttccttttaaggaacaggttgaag
atagtgtggtgtaccaagttggcaagggcacaggaccaggcggaaagagagaagattgag
gaggaaatgaaggggacagatttgcagcctattttggagcagttgcatgcaacaagggcc
tctgcgaaggagaggcagaagaacttggagaagagtataagggaagaggcacgtaggttg
aggggcgataccggcggtgatggggacagggacagggcgaagagcaggagggggcttgct
gatagagattcagagagtggatggttgaaaggtcagcgtcagatgcttgatctagataac
cttgcttttgcacaaggtggtttgtttatggcaaaaaagaagtgtgaccttccagatggg
tcctataggcatcttagcaagggttatgaagaaattcatgtgccggctttgaaggctaaa
ccacttaaggagaatgagaagcttgttaagatatcttctatgccggactgggcacaacca
gcctttaaaggaatgacacagttgaatagggttcagagccaggtttacgagactgctctt
ttcaagcctgacaatcttcttctttgtgctccaactggggctggtaaaactaatgtggcg
gtcctcacaattctccagcagattgccctgcctagaaatccagatgatggttcaactgat
catagtgcatacaaaattgtttatgttgcacctatgaaagcccttgtagctgaggttgtt
gggaatttatccaatcggctgcagagttatgatgttaaagttagggagctcagtggagat
caatcgttaacccgacaacagatagaggagactcaaattattgtgacaacacctgagaag
tgggatattatcactcggaagtcaggagatcgtacttacacacaacttgtgaaactagtt
atcattgatgagatccatcttcttcatgataatagaggtcctgttcttgaaagcattgtt
gctagaacacaaaggcagattgcaaccacaggagagtatattcggttggtgggtttgtct
gctactctccctaattatgaagatgtggcacaatttttaggagttgaactggagaagggg
ttgttctattttgataatagttataggcctgttcccctttctcaacagtatgttggaatc
acagtaaagaagccgcttcagaggttccagttgatgaatgatatttgctatgagaaagtt
atggctgtggcaggaaaacatcaagttcttatatttgtacattcaaggatagaaactgct
aaaacagctaaagccatcagagatactgctcttgcaaaagatactcttggtagattcctt
aaagaagacagtgcaagtcgggagattcttcatactcatactgaccttgtgaagagcaat
gatcttaaggatcttctgccatatggttttgcaattcatcatgccggtttgaccaggaca
gatcgtcagcttgttgaggatctctttgctgatgggcatgtgcaagttttggtatccact
gcaacccttgcctggggtgtgaatcttccagctcacacggtgataattaagggaacacag
atttacaatccggataagggagcatggactgaactgagccctcttgatgtgatgcagatg
ctgggtcgtgctggaaggccccagtacgactcttatggtgaaggaataattgttactagc
catagtgagttgcagtattacctctcacttatgaatcagcaacttcctattgagagccag
tttgtgtccaagttggctgatcagctgaatgcagaaattgttcttggtactgtccaaaat
gctagagaagcctgtgattggcttgcacagacttacttgtatgtccgcatgcggcgtaat
ccttcactttatggtttagaacctgatgtgctgacaagagatataagattggaggaaaga
agagctgatttgattcatacagctgcagccatcttggatagaaataatttggtgaagtat
gacaggaagagtgggtattttcaggtcactgacttgggtcgcattgcgagttactactac
ataacacatggaaccatctccacatataacgagcatttgaagcctacaatgggaaacata
gagctatgccgattgttctcactgagtgaagaattcaagtatgtgacggtaaggcaggat
gagaagatggagctagcaaagcttttagaccgtgttcccattcccatcaaggagagtttg
gaagagccaagtgtgaaaatcaatgttttgcttcaaacatacatttcacagttaaagctt
gaagggctttcactaacatctgatatggttttcataactcagagtgctggacgccttttg
cgggctctttttgagattgtactgaaacgtggatgggcacagttggctgaaaaggctctg
aacttgtgcaagatggtgacgaagaggatgtggagtgtccaaacacctcttcgtcagttc
aatggtatccctggtgatgtattaacgaagttggagaagaaagatttggcttgggagagg
tattatgacctatcatcacaagagataggtgaactcattcgtgctccaaagatgggaagg
atgcttcataaatatatccatcaatttccaaaactgaaccttgcagctcatgtgcagcct
attactcggacagttctgagggttgaactcacaataactccagattttgcatgggatgac
agaattcatggttatgttgagcccttttgggtgattgttgaggacaatgatggtgaatat
atccttcatcatgagaattttatgctgaaaaagcagtttattgatgaggatcatacgctg
aatttcacagttccaatctacgaacctcttcctcctcaatacttcatccatgttgtttca
gatagatggcttgggtcacagactgttctacctgtttccttcagacaccttatcttacct
gaaaagtaccctcccccaactgaactcttggacctgcaaccactgcctgtgactgcattg
agaaatccaaagtatgaagcactttatcaggatttcaagcatttcaatcctattcagacc
caagtattcacagttctgtataattctgatgacaatgtattagttgctgcaccaacagga
agtggtaagaccatctgtgcagaattcgctattttgaggaatcatcaaaaagggcctgat
agtgtaatgcgtgttgtttatattgcacctattgaagctcttgccaaggaacggtatcat
gattgggagaagaaatttggtaaagatggtcttgaattgaaggtggttcaattgactgga
gaaacagcaactgatttgaagctacttgagaaaggtcagattatcattagcaccccagag
aagtgggatgctttatcccgccgctggaaacagaggaaacatgtgcagcaggttagtctt
ttcatcattgatgaactccacttaattggaggtcaaggtggtcctgttttggaagtcatt
gtttcgaggatgagatatattgctagtcaggttgaaaacaagattcgtattgtggcattg
tctacctctcttgcaaatgccaaggatctaggagaatggattggagctacttcccatggt
cttttcaacttcccccccggcgttcgtcctgtacctttggaaatacacattcaaggtgta
gacattgccaattttgaggcaaggatgcaagcaatgacgaaaccaacttccgctgcaatt
gttcagcatgccaagaatgctaaacctgctcttgtatttgtgcctacaaggaagcatgtg
cacacgacagctgtggatctgattacatactcgggtgcagacagcacagagaagccattc
ttattgcggtccccagaagagcttaaaccttttcttgacaagattagtgataaaatgttg
aaagccactttacaagaaggagtgggatacttgcatgagggcttaaacaatctggattat
gatatcgtgacccaactgtttgaagctggctggattcaggtgtgtgttttgagtagttct
atgtgttggggagtgacattgtcagctcacttggtagttgtgatgggcacacagtattac
gatgggcgtgaaaatgcacagtcagattaccctgttactgatcttctgcagatgatgggt
catgccagccggcctttggtagatagttctgggaaatgtgtcatcttgtgtcatgcaccc
cgtaaggaatactataagaaatttttatatgaagctttccctgttgagagccaccttcat
cacttcttgcatgataacttgaatgctgaaattgttgctggggttattgagaataagcaa
gatgctgtagattatctcacatggacattcatgtacaggcggctcacacaaaatcccaac
tattacaatctacaaggagttagtcacagacatctttctgatcacctttcagagcttgtg
gaaaatacattgagtgatttggaagcgagcaagtgtattctgatcgaggatgacatggat
ctttctccactcaatcttggtatgattgcttcatattattacatcagttacacaacaatt
gagcggttttcatcatctttgacttcaaagacaaaaatgaagggtcttttggaggttcta
tcttcagcttctgagtatgctcagcttccaatacgacctggggaggaagaggtggttcgc
agattaatcaatcaccaaaggttttcatttgaaaacccccgagtcacagacccacatatt
aaagctaatgctttgctgcaggcccacttctctaggcaatttgtcgggggaaatcttgca
caggaccagagggaggttcttctttctgcaaatagattgcttcaggcaatagtagatgta
atatcaagtaatggttggctaagcttggctcttcttgccatggaagttagtcaaatggtt
actcaaggaatgtgggaacgtgactccatgctattacaacttcctcactttactaaggat
ctggctaagaaatgccaggagaacccagggaagagtatagaaactgtgtttgatttatta
gagatggacgatgatgaaaggcgggagttgttgggcatgccagattcccagttgtttgat
attgccagattttgtaatcgtttccccaatattgatttgtcatatgaggtgatagacagt
gacgtgcgggctggggaagatgtcacaatacaagtcactctcgaacgggatcaggcagaa
gtaggacctgttgatgctcccaggtatccaaaatccaaggaggagggatggtggcttgtt
gttggtgacaccaaacacaacttgttgcttgccattaaacgggtttcgcttcagcggaag
ctaaaagccaaactggagtttgctgctcctgctgatgctggaaagaaatcctataccctt
tacttcatgtgtgattcattcatgggctgtgatcaggagtatgcttttgccattgatgtc
aaagaagcaggggctgctgattga
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integrated database retrieval system
