Arachis duranensis: 107493041
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Entry
107493041 CDS
T04300
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7-like
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
adu
Arachis duranensis
Pathway
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107493041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adu03041
]
107493041
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107493041
Spliceosome [BR:
adu03041
]
Complex C
Other components
Step II factors
107493041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
SLFN-g3_helicase
Flavi_DEAD
AAA_30
AAA_24
nSTAND3
AAA_16
T2SSE
ABC_tran
PhoH
TMEM247
ATPase
AAA_7
ResIII
Motif
Other DBs
NCBI-GeneID:
107493041
NCBI-ProteinID:
XP_015969605
UniProt:
A0A6P4DK22
LinkDB
All DBs
Position
6:complement(16535659..16542009)
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AA seq
1118 aa
AA seq
DB search
MEVPASPSGYERENDRNERRHHRDESRSGSRRLTHVDNFESKEPYFERDSRSRYGHEYNR
KREHYSERDSRSRYDHERGRSKEPYSKRDSRSRYDHEYGRKRSRYEGSRRTPGRPDWDDG
QWEWEDTPRRDSVSSSRRHQPSPSPMFLGASPDARLVSPWLGGNTPYSSSPWDHVSPSPI
PIRTSGSSVKSSTSRYSGRSHQLTFSSGASSSYEDEVTDKSEFGEEHKYEITESMHAEME
YDADRAWYDREEGSTMFDGEDNSSLFLGDEATFQKKEAELAKRLTRRDGTKMSLAQSKKL
SQLTADNAQWEDRQLLRSGAVRGTEVQTEFDDEEERKVVLLVHDTKPPFLDGRVVFTKQA
EPIMPIKDPTSDMAIISRKGSTLVKEIREKQSSNKSRQRFWELAGSKLGDILGVEKTAEQ
IDADTATVGEQGEIDFKEEAKFSQHLKKEEAVSDFAKSKSIAEQRQYLPIFSVRDDLLQV
IRENQIVVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVAKRVSEEMETE
LGEKVGYAIRFEDVTGPNTIIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLNTDVL
FGILKKVVARRRDFKLIVTSATLNAQKFSHFFGSVPIYHIPGRTFPVTTLWSKTPVEDYV
EGAVKQAMRIHITSPPGDILIFMTGQDEIEAACYALAERMEQMVSSSKKAFYVIDTGYGK
MKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCCRLYTESAYLNEMLPSPVPEIQ
RTNLGNVVLLLKSLKVDNLLDFDFMDPPPQDNILNSMYQLWLLGALNNVGALTDLGWKMV
EFPLDPPLAKMLLMGEQLGCLEEVLTIVSMLSVPSVFFRPKDRAKESDAARERFFVPESD
HLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDIVKTLKISLTTCWPDTD
IVRKAICSAYFHNAARLKGVGEYVNCRTGMPCHLHPSSALYGMGATPEYVVYHELILTTK
EYMQCATAVEPQWLAELGPMFFSVKESDTSLLEHKKKQKQEKTAMEEEMENLKKMQAEIE
RKQKQEEKEKLAKQQLQVCMPGLKKGSSTYLRPKKLGL
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggaggtccctgcttcaccctctggatatgaaagggagaatgataggaatgagaggagg
catcacagagatgagtcaagaagtggtagcagaagactgacacatgtagacaattttgaa
agtaaggagccttattttgagagggattcacgtagtaggtatggccatgaatacaacaga
aagagggagcattattctgagagggattcacgtagtagatatgaccatgaacgcggtaga
agtaaggagccttattcaaaaagggattcccgtagtaggtatgaccatgaatatggtaga
aagcgaagcagatatgagggttccaggagaacacctggcaggcctgactgggatgatggg
caatgggaatgggaagatactcctcgaagggacagtgtctctagttctagacgtcatcaa
ccttcaccatcccctatgtttcttggtgcctcacctgatgcacgattggtttctccatgg
ttaggaggcaatactccttattcttcttctccatgggaccatgtgtctccatctcctatt
ccaatacgtacttctggttcttcagtcaaatcttctacttctagatatagtggaaggtcc
catcaacttactttttcttcgggagcttcaagttcgtatgaggatgaagtgactgataag
tccgagtttggtgaagaacacaagtatgagattactgaaagcatgcacgcagagatggaa
tatgatgctgaccgggcatggtatgatagagaggaaggtagcacaatgttcgatggagaa
gataactcatccctttttcttggagatgaggctacctttcaaaaaaaagaggctgagctt
gccaaaagactgactagaagagatgggaccaagatgtcccttgctcagagcaagaaattg
tctcagctcacagctgataatgctcaatgggaggacagacaactgctgagatcaggagcc
gttagaggtacagaggttcagactgagtttgatgatgaggaagaacgcaaagttgttctt
ctggtgcatgatacaaaacctccattccttgatggcagagttgtttttactaagcaggca
gagccaattatgccaataaaagatccaacatctgacatggctataatttctcgtaaagga
tctactctggtcaaagaaatacgtgagaaacagagttcaaataagtctcgtcaacgtttt
tgggagcttgcaggctcaaaacttggcgatatcttaggtgttgaaaagacagcagaacag
attgatgcagacactgctacagtgggtgaacagggtgaaatagattttaaggaagaagct
aagttttcacagcatttgaaaaaggaagaggctgtgagtgattttgccaagtcaaagagt
attgcagagcaaaggcaatatctgcccattttttcagtgcgagatgacctattacaggta
attcgagaaaatcagattgtggtagtggttggagaaacaggctcaggaaagacaacccaa
ttgacacagtatctgcatgaggatggctacactataaatggtatagtaggttgcacccaa
cccaggcgtgtggcagctatgagtgtggccaagagagtcagtgaggagatggagacagag
ctgggtgagaaggttggctatgctatacggtttgaggatgtgactgggccaaataccatt
ataaagtacatgacagatggggttcttctacgagaaacactcaaagactctgatctagac
aagtatcgggttattgtcatggatgaagcccatgaaagatcattaaacacggatgttctt
tttggaatattgaagaaagttgtagctcggcgtcgtgattttaagttgattgtcacgtca
gcaacgctgaatgcacagaaattttcacatttcttcggaagtgtgccaatttatcatatt
cctgggagaacatttcctgtgactacattatggagtaaaactccagttgaagattatgtt
gaaggtgcagtgaagcaggccatgaggattcacattactagtcctccaggtgacattctt
atcttcatgactggccaagatgagattgaggcagcttgctacgcccttgcagaaagaatg
gagcagatggtctcttcttcaaagaaagcattctatgtcatagacacaggttatggtaaa
atgaaggtgtataacccaaggatgggaatggacgctctccaagtcttccccgtcagccgt
gctgctgctgatcagcgtgctggtcgagctggtagaactgggcctggtacatgttgtcga
ctgtacacagagagtgcttacctaaatgaaatgttgcccagccctgtccctgagattcaa
aggactaacctcggcaatgtggtcttgttgctgaaatctcttaaagttgataatttactt
gattttgatttcatggacccacctccgcaagataatattctcaattctatgtaccagttg
tggttattgggtgcccttaacaatgtgggtgccttaacagatcttggctggaaaatggtt
gagtttccactggaccctccacttgccaagatgcttttgatgggtgaacagctagggtgc
cttgaggaggttctgacgattgtttccatgctttcagtaccgtcagttttctttagaccc
aaggaccgagcaaaggagagtgatgctgcacgcgaaagattttttgtgccagaatctgat
cacttaaccctgtacaatgtctatcagcaatggaaacagcatgattacagaggtgactgg
tgtaatgatcattttttgcatgttaaaggtctaagaaaggccagagaggtgagatcccag
ctgcttgatattgtcaagacactgaagatctctctaaccacctgttggcctgatacagac
atagtcagaaaagcaatttgctcagcatacttccacaatgcagcaagattaaagggtgtt
ggagagtatgtcaactgccggactgggatgccgtgtcatctacaccccagtagcgcactc
tatggcatgggtgcaactccggagtatgtggtttatcacgagttaatcctaaccacgaag
gagtatatgcaatgtgctacagccgtggagccccagtggttggctgagcttggacccatg
tttttctctgttaaggagtctgatacatcattgctggagcataagaagaaacagaaacaa
gagaagacggccatggaggaggagatggagaatttgaagaagatgcaagcagagattgag
agaaaacagaagcaggaggagaaagaaaagttggctaagcagcaactgcaagtctgcatg
ccaggtttgaaaaaggggtcttccacatatttgagaccaaagaaacttggtttgtaa
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