Arachis duranensis: 107493397
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Entry
107493397 CDS
T04300
Name
(RefSeq) uncharacterized protein LOC107493397 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107493397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adu03000
]
107493397
03019 Messenger RNA biogenesis [BR:
adu03019
]
107493397
04121 Ubiquitin system [BR:
adu04121
]
107493397
Enzymes [BR:
adu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107493397
Transcription factors [BR:
adu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107493397
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107493397
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107493397
Ubiquitin system [BR:
adu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107493397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-RING_2
Baculo_IE-1
Rtf2
Motif
Other DBs
NCBI-GeneID:
107493397
NCBI-ProteinID:
XP_015969978
UniProt:
A0A6P5M4P7
LinkDB
All DBs
Position
6:22682851..22689380
Genome browser
AA seq
867 aa
AA seq
DB search
MCDKGGKSCPICTEEMDLTDQQLKPCKCGYEICVWCWHHIMEMSEKDGTGGRCPACRVPY
DKERIVAMAANCQRLVAEMNSKHRKKMQKLKSKSTEGRKHLTDVRVIQRNLVYIIGLALN
LADEDLLQRKEYFGRYGKVMKVSISRTASGIIQHSANNSCCVYITYSKEAEAIRCIQSVH
CFVLEGRPLRACFGTTKYCHAWLRNVPCSNRDCLYLHDYGSQEDSFTKDELVLAFARSRV
QQIIGATNNLHRRSGCVLPPTEDDPRHMSSTSKLISKSTLDKIENQIKASCSGSGTMTSP
APPAVTSWVMRVSGSLPPDTNSSFPGQSAEAGKNPEDHSGGMFVPTEMDKHHNSGNSQKS
FVDSDQDMVPSAANSGFLNLSKSQCDFNIDKSVGLDSNRDVEGLCSDLSSISLHNHVEDP
YSVPDSDRLLYMHGSNNSSLGKHLQQDNEYPEEHSTTPAFWEDVVDDVLNLDYEQSKFSK
GVNHLSTGICSPYLHKNAGRSSHHLWQQDQNCHEHDLGKPSESFNDALQTGFEEHVGDKE
NVNKVTSDMGESSIISNILSLDLDAWEDSLVKLLEENEEPSKALKSPNLWRSQDKNQSRF
SFARQDALVDDSSDLDQLIGITRHVSRGNVESDALMENKDMWRYSNNTVNGKHPCSVPSI
NYALPDKFLGMSKAHASSPPGFSLSSRVPPGFSGGGVEYNSSIHGKHLSQQHVLASGDIG
KVGDVQFNDLALLEIGKGMLTERVNNASLDMMRTSFPQFSPGEDDPRLKMLMHQSAPLQN
LNVTDHAGNIFSPQNDAYRISSRFLDQFPANNPSIYEQIHSQQFSNNGLSSNSQWGGWHD
ARNFNDLPMPQVLNNERKRFNNSMPSY
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacaaaggggggaaatcatgtccgatatgcactgaggagatggacctgactgat
cagcagctgaaaccatgcaaatgcggctatgagatctgtgtctggtgttggcaccacatt
atggaaatgtcagaaaaggatgggactggtggtcgttgtccagcttgccgtgtgccttat
gacaaagaacgtattgtggcaatggcagcaaattgtcaaaggttggttgctgaaatgaat
tcaaagcatagaaagaaaatgcagaagttgaagtccaaatcgactgaaggaaggaaacat
cttactgatgttagagttattcaacggaacctagtgtacataattgggttggctcttaac
cttgcagatgaagatctacttcaacgcaaggagtattttggcaggtatggaaaagttatg
aaagtgtcaatttctcggacagcttcgggcataatccaacattctgcaaacaacagctgc
tgtgtgtatataacgtactcaaaagaagcagaagcaattcggtgtattcaatcagtgcat
tgttttgtattagaaggtagacccttgagggcttgttttggaaccacaaagtattgccat
gcatggttgagaaatgtgccttgcagcaacagagattgcttatatctgcatgattatggc
tctcaagaagatagctttaccaaagatgagctagtattagcatttgcaaggagtagagtc
caacaaattattggggctacaaataatttgcatcggcgctcggggtgtgttttacctccc
acagaagatgatcccagacacatgtcatcaacctccaaactaatttcgaaaagcacttta
gataaaatcgagaaccagataaaggcatcttgttcaggtagcgggaccatgacttcacct
gcacctcctgctgtgacttcctgggtcatgcgtgtttcgggttctcttccacctgataca
aactcatcgttccctggacaatcagcggaagctggaaaaaacccagaagaccattctggt
ggtatgtttgtacctacagagatggacaagcatcataatagtggaaattctcagaaatct
tttgtagatagtgatcaagatatggtaccttctgctgcaaactcgggctttctaaatctc
tccaaatcacaatgtgattttaatattgacaaatcagttggccttgattcaaatcgggat
gtagaaggcttatgttcagatttgtcatcgataagcttgcataatcacgtggaagatcca
tattctgttcctgattcagatagattactgtatatgcatggctcaaataattcatctctt
gggaagcatttgcagcaagataatgagtatcctgaagaacattcaaccactccagctttt
tgggaagatgttgtggatgatgtactgaacttggattatgaacaatcaaagttcagcaaa
ggcgtcaatcatctttctacagggatctgttcgccttatctccataagaatgcaggccgg
tcaagccatcatctctggcaacaagatcaaaattgtcatgaacatgacttgggcaagcct
tctgaatcttttaatgatgccttacagacaggatttgaagagcatgtaggggataaagaa
aatgttaataaggtaacttcagatatgggggaaagcagcattatatctaatattttgtct
ttagatttggatgcgtgggaagactcattagttaagttgttggaggaaaatgaagaacca
agcaaagcccttaagtcaccaaatttgtggagaagtcaagacaaaaatcagtcaaggttt
tcctttgcaagacaagatgcacttgtggatgactcatctgatttggaccaattgattgga
attactaggcacgtttccagagggaatgttgaatcagatgctttaatggaaaacaaggat
atgtggagatactcgaataacactgtcaatgggaaacacccgtgttctgtgccgtcgatc
aattatgcactaccagataaatttcttggaatgtcaaaggctcatgcttccagcccaccg
ggattttcattgtccagcagagtacctcctggcttttcaggtgggggagtagaatataat
tctagtattcatgggaaacacttgtcgcaacagcatgttcttgcatctggagatatcgga
aaggttggagatgttcaatttaatgatcttgcattattggaaattggtaaggggatgcta
acagaaagggtaaataatgcatctcttgacatgatgcggacttcgtttccacaatttagc
cctggtgaagatgatcctagactcaagatgttaatgcaccaatctgcacctttacagaat
ttaaatgttacagatcatgcaggaaatatattttctccacaaaatgatgcatatagaatt
tcttcaaggtttcttgatcaatttccagctaacaatccatcgatttacgaacagatacat
tctcaacagttcagcaataatggtctttcatcaaatagccagtggggtggttggcatgat
gccaggaactttaatgacctgcctatgccgcaagtattgaataatgagagaaagaggttt
aacaattccatgcctagctattag
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