Arachis duranensis: 107493974
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Entry
107493974 CDS
T04300
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
adu
Arachis duranensis
Pathway
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107493974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adu03041
]
107493974
03009 Ribosome biogenesis [BR:
adu03009
]
107493974
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107493974
Spliceosome [BR:
adu03041
]
Complex A
U1 snRNP components
U1 related factors
107493974
Complex B
107493974
Ribosome biogenesis [BR:
adu03009
]
Eukaryotic type
Pre-60S particles
Helicases
107493974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
107493974
NCBI-ProteinID:
XP_015970497
UniProt:
A0A6P4DLZ5
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Position
1:complement(69036171..69040265)
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AA seq
627 aa
AA seq
DB search
MNPYDNRYSDAASYRNRRSDILGSGPFMPPPVVGRGAAVPYGAPPVPYGAGRGAPNAFGS
SSVTSFTPPPGGFNIGRGGGGLGNGHAGGRKDGGGRYGTGGRGRGGTGRNGGTGRGGGSG
FRGGRSHGGGRGGGGGRHGGRSSKDELNKISLPKQDFKNLVPFEKNFYVESPAVRAMSDQ
EVMHYRASREITVQGHDVPKPIRMFHEARFPDYCLEVIENLGFVEPTPIQAQGWPMALKG
RDLIGIAETGSGKTLSYLLPALVHVSAQPRLSHGDGPIVLVLAPTRELAVQIQEEAQKFA
GRANIRTTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEAD
RMLDMGFEPQIRKIVGQIRPDRQTLYWSATWPKEVEALARQFLRNPYKVIIGSPELKANQ
SINQVVEVVTDAEKYNRLIRLLKEVMDGSRILIFMETKKGCDQITRQLRMDGWPALSIHG
DKNQAERDWVLAEFKNGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTG
RAGAKGTAHTFFTHANAKYARALIKILQDAGQVVSPALSALARSAGSAQLGSGGSFRSRG
RGGFGNRGGRSGSNTIPLGSKRPWHGM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaacccctacgataacagatactctgacgccgcttcttatcgcaaccgtcgcagcgat
atcctcggttctggaccattcatgccgcctcctgttgtaggtcgtggtgctgcggtcccc
tacggtgcccctccggtcccttatggtgcaggaagaggagctccgaatgccttcgggtcc
tcgtcggtaacttcctttacgccccctcctggtggtttcaatataggccgaggcggtggt
ggacttggtaatggccatgctggtggcagaaaagacggcggaggtcgttacggtactggt
ggaagaggtcgcggaggtactggtagaaacggcggaactggtagaggcggtggaagcggt
tttaggggaggcagaagtcatggtggtggaagaggaggaggaggtggtagacatggtgga
cggtcatcgaaggatgaattgaacaagatttccttgccaaagcaggattttaagaatttg
gtcccttttgagaagaatttctacgttgagtcccctgcagtgagggccatgtccgatcaa
gaagtgatgcattatcgtgccagtagagaaataacagtgcaaggccatgatgtgccgaaa
cccattcggatgttccatgaggccaggtttcctgattactgccttgaggtgattgaaaac
ctgggatttgttgagccgactccaatccaggcccagggttggccgatggctcttaaaggc
agagatttgattggcattgcggagactggctccggcaaaactttgtcatatctgcttcct
gctttggtgcatgtcagtgcacaacctcgactgtcacatggggatggtcccattgtctta
gttttagcaccaactagagagttagctgttcaaattcaagaagaagctcagaaattcgca
ggacgggcaaatattagaactacatgcatctatggtggtgcaccaaagggacctcaaatt
cgtgaccttcaaaggggtgtagagattgttattgctacaccaggtcgccttatagatatg
ctggaagctcagcacacaaacttgcagagagttacttaccttgtcttggatgaagctgat
aggatgttggacatgggttttgaacctcagataaggaaaattgtaggccagattcgacca
gatagacagacgttatattggagtgctacatggccaaaggaggttgaagctctggcaagg
cagttcctgcgcaacccatataaggtaattattgggtcaccggaactgaaagcaaaccaa
tctataaatcaagttgttgaagttgtgacagatgcagagaaatataacagattgattaga
ttgctgaaagaagtgatggatgggagccgaattctaatatttatggagacaaaaaaggga
tgtgatcaaattacaagacaattgaggatggatggatggccagctctatccatccatggt
gataaaaaccaggctgaaagagactgggttttggctgagtttaagaatggtagaagtcca
ataatgactgccactgatgttgctgcacggggtcttgatgtgaaagacataaaatgtgtg
gtcaattatgattttccttcaagcctggaagattatgtacacagaattggtcgaactggt
cgtgcaggggctaaagggactgcgcacaccttcttcacacatgctaatgctaagtatgcg
agggctctgataaagattttacaagatgcaggtcaggttgtgagtcctgcactatctgca
ttggctaggtcagctggttctgctcaattaggatccggaggaagctttcgatcaagagga
cgtggaggctttggcaacagaggtggaagatcaggatccaataccattcctctaggttca
aaaaggccttggcatggtatgtag
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