Arachis duranensis: 107494162
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Entry
107494162 CDS
T04300
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
adu
Arachis duranensis
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107494162
03036 Chromosome and associated proteins [BR:
adu03036
]
107494162
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107494162
Chromosome and associated proteins [BR:
adu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107494162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HTH_44
HHH_9
SH2
HHH_3
OB_PDCD11
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
107494162
NCBI-ProteinID:
XP_015970675
UniProt:
A0A6P4DM78
LinkDB
All DBs
Position
6:78106357..78116146
Genome browser
AA seq
1646 aa
AA seq
DB search
MAKAVVSDEEDEVEYEEEERDPADGDGLEDGRDVDDDDEEDEEEGQDEYENDGFIVDDVE
DEDEQDEERPESDDERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKKG
RRDTEEEPSGLSGEEFDGSGKVGRTAEEKLKRSLFGDDEGAPPEDIVEEEEQGEEEEEDA
DIGEDDEMADFIVDEDVMDENGDLVRRRKLKRKKTRQAPGVSSSALQEAQELFGDVEELL
QNRKHKLESNEYRETRLEDEFEPIVLSEKYMTEKDDQIRELDIPERMQISEESTGAPPMD
GGILEEESQWIVSQLGNGAVPWISKKITSNQNGAKELPIEKDDILRFLEMHHVQKLDIPF
IAMYRKEECLSLLKDLERSEDGDENWDKNNKTPTLKWHKVLWALQDLDRKWLLLQKRKSA
LQQYYRKRFEEESRRVYEETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPGE
VGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSAEQLGLCLSLVALHELEDPKETPEE
MASNFTCTMYDTPQEVLKCARHMAAVEISCEPSIRKHVRTHFLDHAVVSTCPTADGNTTI
DSFHQFAGVKWLREKPLSKFEDAQWLLIQKAEEEKLLQVTIKLPEEYLNKLIDQFNEYYI
SDSVSRSAQLWNEQRKLILNDAIFRFLLPSMEKEARGVLSSKAKNWLLMEYGKALWSKVS
VGPYQQKENDLSSDEEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTFRSQNV
NDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGHEM
DGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMIATLCGPRKEI
LSWKLSSLESFLNPDDKFAMIEQVLVDVTNQVGLDINLAINHEWLFAPLQFVSGLGPRKA
ASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRI
HPESYSLAIELAKDVYEEDGTGDANDDDDAEMAIEHVRDRPSYLKNLDVEEYAAGKKRQN
KIETFYDIKRELIQGFQEWRKQYEEPSQDEEFYMISGETEETLAEGKIVQATVRRVQAQK
AICGLESGMTGILMKEDYTDDWRDVVELSDRIHEGDILTCKIKSIQKNRYQVFLVCRESE
MRSNRFQNNRDLDPYYHEDRSSLQSDQDKARKEKELAKKHFKPRMIVHPRFQNITADEAM
EFLSDKDPGESIIRPSSRGPSYLTLTLKIHDGVYAHKDIVEGGKEHKDITSLLRIGKTLK
IGEDTFEDLDEVMDRYVDPLVTHLKAMLNYRKFRKGTKAEVDELLRLEKSEYPMRIVYSF
GISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDS
APSIRSVAAMVPMRSPAAGGSSGGSTGSGWGGSNNEGGWRGNSYDRDRSSTPGSRTGRGD
YRHNNRDEHPSGVPRPYGGGRGRGRGRGRGSYDNNRGHGSNNERQDSGYGGSRWSSAKKD
ADDLSNFPGAKVQNSPGREAFPGGWGGSGGGSSSGWGGGNSGDDNGGWGGGAGPSDTDNG
GSGWGAGSKKASDNGWSGNAGGGSGW
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccgtcgtctctgacgaagaagatgaggtcgagtacgaggaggaagagagg
gaccccgctgatggagatggtttggaagacggtcgggatgtggacgatgacgatgaggaa
gatgaagaagaagggcaggatgaatatgaaaatgatggatttatagtggatgatgttgaa
gatgaagatgagcaagatgaagagaggccagaaagtgatgatgagcggcagaagaagaaa
aagaggaagaaaaaggaggagtatgtccttgatgaagatgattatgagttgttggaggat
aataacatcaatattcatcgtcggaaggagagcaaaaagttcaaacggctgaaaaaaggt
cggagggataccgaggaggagccctctggattatctggtgaagagtttgatgggagtggt
aaagttgggcgaactgctgaggagaagcttaaacgcagtttatttggtgatgatgaagga
gctccacctgaagacattgttgaagaagaggaacaaggagaggaggaggaggaggatgca
gacattggagaagatgatgaaatggctgacttcattgtggatgaagacgtaatggatgag
aatggagatcttgtgagacgaaggaagctgaagagaaagaaaactaggcaggcaccaggt
gtctcttcatcagctttgcaagaagcacaagagttatttggtgatgtggaagaattgctg
cagaaccgcaagcacaaactggaatcgaatgaatatagagaaactagacttgaggatgaa
tttgagcctattgtcctttcagagaagtatatgacagagaaagatgaccagataagggag
ctagacattccggagagaatgcagatatctgaggagagtaccggtgctcctcctatggat
ggaggtattttagaagaggagagccaatggatagttagccaacttggcaatggtgcagtc
ccttggatttccaagaaaatcacaagcaatcaaaatggggctaaggaactaccaattgag
aaggatgatattttaagatttttggaaatgcatcatgtgcagaaattagatattcctttt
attgctatgtatcggaaggaggagtgcttaagcttattaaaagaccttgagcgatctgaa
gatggtgatgagaattgggataagaataacaagacacctactttaaaatggcacaaggtt
ctctgggctctacaggatttggacaggaagtggttacttcttcagaagaggaagagtgcc
cttcagcaatactatagaaaacgatttgaagaagagtcacgccgtgtttatgaggaaaca
cgactaaacttgaaccggcagttgtttgaatctgttatgagatccctgaaggaggcggaa
tctgagagggaagttgacgatgttgactccaagttcaacttgcactttccaccaggtgaa
gttggtgttgatgaaggccaatacaagaggccaaaaaggaagtctatgtatagcactttc
agtaaggcaggtctgtgggaggttgcaagcaggtttgggtgcagtgctgagcaacttggg
ttatgtctctcacttgttgctctgcatgagttggaggatccaaaggaaacaccagaggag
atggcttcaaattttacatgtaccatgtatgatacccctcaagaagtacttaagtgtgct
aggcacatggcagccgttgagataagttgtgagcctagcattaggaagcatgttcgcact
cactttcttgatcatgcggtggtgtctacctgtcctactgctgatggaaatacaacaata
gattctttccatcagtttgctggtgtgaagtggctgcgcgagaagccattgtctaagttt
gaggatgcccaatggctccttatacagaaggcagaggaggagaaacttctccaagttact
attaagcttcctgaagagtatcttaataagttaatagaccaatttaatgagtattatatt
agtgatagtgttagtagatctgctcagctgtggaatgaacagaggaagctgatattgaat
gatgcaatctttcggtttctcttaccatctatggaaaaggaggcaagaggtgttttgtca
agcaaggcaaagaattggttacttatggagtatgggaaggcattatggagtaaggtttct
gtggggccttatcagcagaaggaaaatgatcttagctctgatgaagaggccgctcctagg
gttatggcatgttgttggggccctggcaaaccacagacaacttttgttatgttggattct
tcaggagaagtgctagatgtgctttacactgggtctcttacttttagatcacagaatgtc
aatgaccaacaacggaagaagaatgaccaggaacgcgtgctgaagtttatgacagatcac
caaccacatgttgttgttttgggagctgtaaatttgtcttgcactcgtctaaaggaagat
atatatgaggtcatttttaagatggtagaggaaaaccctcgagatgttgggcatgaaatg
gatgggctcagcattgtgtatggggatgaatctcttccccgtctttatgaaaattcacga
atttcctccgaacaacttccttcccaacaaggtatagtgaggcgggctgttgcacttggt
cgatatcttcagaacccattggcaatgattgcaacattatgtggacctagaaaggaaata
ttatcatggaaactgagctctttagagagctttcttaacccagatgataagtttgctatg
attgagcaagttttggtagatgtgactaatcaggttggattagatattaatctggcgata
aatcatgagtggttatttgcaccattgcaatttgtttccgggcttggtccacgaaaggct
gcatccttgcagagatcattggtgagagctggtgcaatttttactcggaaagacttcctg
acagaacataaactgggtaaaaaggtgtttgtcaatgcagttgggtttttgcgtgtacga
cgaagtgggttggctgctagcagcagccagtttattgatttgctggatgatacaagaatc
catccagaatcatatagtcttgctatagagttggctaaagatgtctatgaggaggatgga
acaggtgatgcaaacgatgatgatgatgctgagatggccattgagcatgtgagagaccgg
cctagctatttgaaaaacctagacgtcgaggaatatgctgctggaaagaaacgccagaac
aagatagaaactttctatgacataaaaagagaactgattcaaggtttccaggaatggcgt
aagcaatatgaagaaccaagccaggatgaggagttctatatgatttcaggtgagactgag
gagactctggcagaaggtaaaattgtccaagccactgttcgcagagtgcaagcccagaaa
gcaatatgtgggcttgaatctggaatgactggaatccttatgaaagaagactatactgat
gattggagagacgtagttgaactttctgataggatacatgagggtgacatactcacgtgt
aaaatcaagtcaattcaaaagaataggtatcaagtcttccttgtttgtagagagagtgaa
atgagaagcaaccggtttcaaaacaaccgtgatcttgatccttactaccatgaagacaga
agctctctgcagagtgatcaagacaaagctcggaaagaaaaggagcttgcgaagaagcat
ttcaagccgaggatgattgtccatccacgctttcaaaatataactgctgatgaagcaatg
gagttcttgtctgacaaagaccctggggaaagcattattcgtcctagttcacgtggacct
tcatatcttactttaacgctcaaaattcatgatggagtgtatgcccacaaagatatagtc
gaaggtggaaaggaacataaggacattacaagcttgcttcgaattgggaagacactcaaa
attggagaggacactttcgaggatttagatgaggttatggaccgttatgttgatcccttg
gtgactcatttaaaggcaatgttaaattaccgcaagttcaggaagggtacaaaagcagaa
gttgatgaacttttgaggctggagaaatctgagtatccaatgcgcattgtctatagtttt
ggcatctcacatgaacatcctggaacatttatattaacttatataagaagtacaaatcca
catcatgagtacattggactttatccaaaaggattcagatttcgcaagaagatgtttgag
gacattgatcggcttgtggcgtattttcagaggcatattgatgatccccagcatgattca
gccccttccattagatctgtggctgctatggtaccaatgcgaagccctgcggctggtggt
tcatcagggggatctacaggtagtggctggggaggttcaaacaatgagggtggttggagg
ggtaactcctatgatagggatcgatcatctactcctggttctaggacaggacggggagat
tacagacacaataatagagatgaacaccctagcggagtgcctcgtccatatggcggtgga
cgcgggcgcggacgcggacgtggtcgaggttcttacgataacaatagaggacatggctcc
aataatgaaaggcaggactccgggtatggtggatctagatggagttcggctaaaaaggat
gcagatgatttaagcaattttccaggggctaaggtccaaaattctcctggaagagaagct
ttccctggtggttgggggggaagtggtggaggtagcagcagtggttggggaggtggaaat
agcggtgatgacaacgggggatggggtggtggtgcaggtccaagtgacaccgataatgga
ggctccggctggggagctggctctaagaaagcatctgacaatggatggtctggaaatgcc
gggggcggctctggttggtga
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