Arachis duranensis: 107494378
Help
Entry
107494378 CDS
T04300
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107494378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107494378
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107494378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
107494378
NCBI-ProteinID:
XP_015970915
UniProt:
A0A6P4DR40
LinkDB
All DBs
Position
6:complement(85099910..85109215)
Genome browser
AA seq
691 aa
AA seq
DB search
MNVDRYLKELSGSSQRIPTEQSFHHFYLNFDEFKRPIDEIARRSQSMLESIGVTTHAWNT
GVDFPSDIDDAYEWVVDMNDELLEWFDESVSEVRKAREEDEEFEEVELENGFGLVRVKKE
GAGVGKKKVEAAGTTETTKPKVSFHLATVRKPQDVYDIVVNNTNVPFEHIWLEKSEDDQR
FIHPLEKHSYLEFVDKNLEGLMPMKPPAMECTPFKLVEDVKGLKELAAKLRAADEFAVDL
EHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRVHVGPYLREVFKDPTKKKVLHGADRDIV
WLQRDFGIYVCNMFDTGQASRVLKLERFSLQYLLLHLCGVTANKEYQNADWRQRPLPDVM
IRYGREDTHYLLYIYDQLRIKLFALSKESESSENPLVEVYKRSYDVCMQLYEKELLTEDS
YLHIYGLLGAGFNAQQLAVVSGLNEWRDILARSEDESTGFILPNKVLLEIAKQMPVTISG
LRRLTSSKLPYVDHNLDVIVNIVRHAIQNAAPFEEAALRLKETYAAKMKEARLKAAQEAS
VVDTAPVEDGVEASHLLDFEHTPEEESTVIDNSTCVNISETLPFSYDLKEDCSQHEDMNG
QVKIKSSCLTLELPQVVGGPIDAIADALSGDSASRNRLNPNEKVKEEIKLDRIRMSVKLE
PVSAAVSADTVMIDSSIDSGCMTQNNLLGSE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgaccgctacctaaaggagctctccggctcttcccagcgaatcccgacggag
cagagcttccaccatttctacctcaacttcgacgaattcaagcgcccgatcgacgaaatc
gcacgtcgctcgcagtcgatgctggagagcatcggcgtcaccacgcatgcatggaacacc
ggcgtggatttcccgtccgacatcgacgatgcttacgagtgggtggttgacatgaacgat
gagctcttggaatggtttgacgagtcagtgagcgaggttcggaaggcgagggaggaggac
gaggagttcgaggaggtggagctggagaacgggttcgggttggttcgagtcaagaaggag
ggagctggtgttgggaagaagaaggtggaagcagcggggactacggaaacgacgaagccg
aaggtgtcgtttcacttagccacggttaggaagcctcaggacgtgtacgacattgtcgtt
aacaacaccaacgtgccgtttgagcatatttggttggagaagagtgaggatgatcagagg
ttcattcatcctttggagaaacactcttatttggagtttgttgataaaaatcttgagggt
ttaatgccaatgaagcctcctgcaatggaatgcactcctttcaagctagtggaggacgtc
aaaggattgaaggaattggctgcgaagctgcgtgctgctgatgaatttgcggtggatttg
gaacataatcaatatcgttcattccaaggtttgacttgcttgatgcaaatctcaaccagg
actgaggattttattgtagatactttaaagctccgtgtccatgttgggccttatctgcgt
gaagtctttaaggaccctacaaagaagaaggtcttgcatggagcagatcgagatattgtg
tggttgcaacgggattttggaatatatgtttgtaatatgtttgacacgggccaggcttct
agggtgttaaaattggagagatttagtttgcaatatcttttactacacttgtgtggggtt
actgcaaacaaagaataccagaatgcagattggagacaacgccctcttcctgatgttatg
ataagatatggcagagaagatacacactatctgctgtatatatatgaccaactgagaatc
aagttatttgctttgtccaaggaatctgaaagttctgaaaatcctctggtggaggtttac
aagcgtagttatgatgtctgcatgcaactatatgagaaagagcttctaacagaagactcg
taccttcatatatatgggttgctgggggctggttttaatgctcagcagcttgctgttgtt
tcagggcttaatgaatggcgggacattttggctcgttcagaagatgagagtactggcttt
attttaccaaataaagtacttcttgaaatagcaaagcagatgcctgttactataagcggt
cttcggcgattgacatcatcaaagctcccatatgttgatcacaatcttgatgtcattgtc
aacattgtcagacatgccattcaaaatgctgctccttttgaagaagcggcactacgcttg
aaagaaacatatgctgcaaaaatgaaggaagcaagattgaaagcagcacaagaagcaagt
gtcgtagatactgctcctgttgaagatggagtagaagcttctcatctgctagattttgaa
catacacccgaagaagaaagtactgtcattgataattcaacctgtgttaatatctcagag
acccttccattttcttatgatctgaaggaggattgctctcagcatgaagatatgaatgga
caagtaaaaattaaatccagttgtctaactttagagcttccacaggtagtaggagggcct
attgatgctattgctgatgctttgtcaggcgattcagcttcaagaaataggcttaatcct
aatgagaaggtcaaggaagagatcaagctagatcgcattaggatgtcagtcaagctggag
ccagtttccgctgctgtgtcggctgatacagtgatgatagactccagtatagattccggc
tgtatgactcagaacaacctattaggctctgaatga
DBGET
integrated database retrieval system
