Arachis duranensis: 107494522
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Entry
107494522 CDS
T04300
Name
(RefSeq) general negative regulator of transcription subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107494522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107494522
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107494522
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107494522
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
107494522
NCBI-ProteinID:
XP_015971048
UniProt:
A0A6P4DYC5
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Position
6:complement(88590487..88601141)
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AA seq
891 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKNRPPRLTHLETSITRHKA
HIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVET
LEDLVTIPPGLSKATPSLSLKNTLAVSASQSASASASQTSEQADDTASQDSNSDIGARTP
PAKVSGIISATSTPAGNHATPLSVNVSTHNLSSAPAAGSVLSGSNSVRSPMENANAANSP
SANQSSSLKEEEINSFPGQRPSPSLSDAALRSISRNNLSNQAAASIPLGAGNMVSNNGTL
GSVPSASEITKRNMLAADDRLGGSSGMVQPLVSPLSNSRLILPQVGKANEAASADSNVIN
EAAAVSSRVFSPSVVPGMQWRPGSPFQNQSDAIRQRTEIAPDQREKFLQKYQQVQQQGHS
TLLTMPSLGGNPKQFSAQQQNPLLQQFNSQGSSVSSQSAIGLGVQSPGFSGISTTTLQQP
PNSVHSPSSQQSLMSGVSKDADVGNSKIEDLQHQNFPDDSAVESTGSTGVGKSLISEDDL
KSTFAADSPAGVSVSLAEAGQTSRDIDLSPGQPLQPNQPTGNLGVIGRRNGTDLGAIGDS
FMGSSSSINPSGVRDQLYNLQMLEAAHYKLPLPRDSERPRAYTPRHPTITPSSYPQTQAP
IVNNPAFWERVGLEPFGTDTLFYAFYYQQNTYQQYLAAKELKKQSWRYHKKYNTWFQRHE
EPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagtcggaagcttcagggagagatcgatcgcgttctcaagaaagtccaggaa
ggtgttgaagtctttgatagtatctggaacaaggtttacgacacagataatgccaaccag
aaggagaagtttgaagcagacctcaagaaggagattaagaagcttcagaggtacagggac
caaattaagacttggattcagtccagcgaaatcaaggacaagaaggttagtgcatcttat
gagcaagctctagtggatgcccgcaagttaattgaacgtgaaatggaaaggtttaagata
tgtgaaaaggagacaaagaccaaagcattctctaaggaaggcttaggtcaacagcctaag
actgatccaaaagagaaggctaaatcagagacaagggattggttgaacaatgtggttggg
gagttagaatctcagattgacaactttgaagctgagcttgaagggctttctgtcaagaaa
ggaaagaacaggccacctagattgacgcatctagagacatcaattactcggcacaaggct
catataaagaaatgtgaatttatcttgaggctattagacaatgatgagttaagtccggag
caggttaatgatgtcaaggatttcttggatgattatgtagagcgtaatcaggaggacttt
gatgaattcagcgatgttgatgaactatacagctcattgcctttagataaggtggagact
cttgaagatcttgttacaatcccccctggcctatctaaggctactcctagtctcagcttg
aagaatactttggctgtttcagcatcacaatcagcatcagcatctgcctcacaaacatct
gagcaagctgatgacacagcatcccaggatagcaattctgatattggtgcaagaactcca
cctgcgaaagttagtggaattatttctgctacttccacaccagctggcaaccatgctact
cctctttctgtgaatgtttctacgcataatttgtccagtgcaccagctgctggatcggtc
ctttctggttcgaattcagttcggagtcccatggagaatgctaatgctgcgaattcacct
tctgcgaatcaatcttcctctttgaaggaagaagagattaatagtttccctggccagaga
ccatccccatcgctttctgatgcagcactaaggagcattagccgaaacaacctttcaaat
caagcagcagctagcatccctcttggtgctgggaacatggtttctaacaatggaaccctt
gggtcagtcccttcagcctctgaaataactaagaggaacatgttggcagctgatgataga
cttggtggaagtagtgggatggtgcagcctcttgtatccccattaagtaatagcagattg
atcttgcctcaggttgggaaggctaatgaagctgcctcagctgactctaatgtcattaat
gaggctgcagctgtatctagtagagttttctccccatctgtggttcctggcatgcaatgg
agacctggaagtccattccagaaccaaagtgatgcgattcgtcaaagaactgaaatagct
ccagatcaaagggaaaagtttttgcagaagtatcagcaagtgcagcagcaggggcacagc
accctgcttactatgccttctcttggaggaaatcctaagcagttttctgcccagcagcaa
aatccacttttgcaacagtttaactcccaaggttcctctgtttcttctcaatctgctatt
ggccttggagtccagtcaccaggttttagtggtatttcaactactacactacaacagcca
cccaattcggtccattccccatctagtcaacagtcattgatgtcaggtgtttccaaagat
gcagatgttggcaattctaaaattgaagatctacaacatcagaattttcctgatgattca
gctgttgaatctactggtagtactggggttggcaagagtctcataagtgaagatgatttg
aaatcaacatttgctgcagattctccagcaggggtatccgtctcccttgcagaagctggt
caaacatccagagatattgatttgtctcctggccaacctttacaacccaatcaacctact
ggtaaccttggtgtcattgggagaagaaatggcacggatcttggagccattggtgatagt
ttcatgggatcaagttcaagtattaatccaagtggagtgcgtgatcaattatacaatttg
caaatgcttgaggcagcacactacaaacttcctctacccagagactcagaacgtcctaga
gcttatactcctaggcacccaacgataacaccttctagttatcctcagacacaggctcct
attgttaataatcctgctttttgggagagagtaggtcttgaaccatttggcactgataca
ttgttctatgcattttattatcaacagaacacttaccagcagtatttggctgcaaaggaa
ctaaagaaacagtcctggagataccacaaaaagtataacacatggtttcagcgtcatgaa
gagcccaaagttgctacagatgaatatgagcaaggaacatacgtatacttcgatttccat
attgcaaatgatgaccttcaacatgggtggtgtcaaagaatcaaaactgaattcactttt
gaatataattatcttgaagacgagcttcttgtatag
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