Arachis duranensis: 107495313
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Entry
107495313 CDS
T04300
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
adu
Arachis duranensis
Pathway
adu03013
Nucleocytoplasmic transport
adu03015
mRNA surveillance pathway
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107495313
09122 Translation
03013 Nucleocytoplasmic transport
107495313
03015 mRNA surveillance pathway
107495313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107495313
03041 Spliceosome [BR:
adu03041
]
107495313
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107495313
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107495313
Spliceosome [BR:
adu03041
]
Complex C
Other components
EJC/TREX
107495313
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107495313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
107495313
NCBI-ProteinID:
XP_015971912
UniProt:
A0A6P4DPX7
LinkDB
All DBs
Position
6:complement(104509920..104516274)
Genome browser
AA seq
427 aa
AA seq
DB search
MGETKDEGYEEELLDYEEEDEKAPDSVGTKVNGEAAKKGYVGIHSSGFRDFLLKPELLRA
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
CHTRELAYQICHEFQRFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR
AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCANDVDVLNNVQSRFEVDIKQLPEQID
TSTYMPS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaccaaggacgaaggatacgaggaggagcttcttgactacgaagaggaggac
gagaaggcacctgactccgttggaaccaaagtcaacggtgaagctgccaagaagggctat
gttggtatccacagttcaggattcagagacttccttctgaagccagagcttctccgggct
attgtggactctggatttgagcatccttccgaagtgcaacacgaatgcatacctcaggca
atccttggaatggatgtgatttgtcaagctaaatctggaatgggaaaaactgcagtgttt
gttctttcaactttgcagcagattgaccctgttgcaggacaagtttctgcacttgttctg
tgccacactagggaattggcataccagatatgccatgagtttcagaggttcagcacttac
ttacctgatctcaaggttgctgtcttctatggaggtgtcaacattaaagttcataaggat
ctactgaagaatgaatgccctcatattgttgttggtacacctggaagaatactagcacta
gctagggacaaggacctttcattgaagaatgttaggcatttcattttagatgaatgtgat
aagatgctggaatcactggacatgagaaaagatgtgcaagacattttcaagatgactccc
catgataagcaagtgatgatgttttctgcaacacttagcaaggaaattcgtcccgtctgc
aagaaatttatgcaagatccaatggaaatttatgttgacgatgaagccaagttgaccctt
catggacttgtgcagcactatattaaattgaaagaggaggaaaagaacaggaagctgaat
gaccttcttgatgcattggactttaatcaagttgtgatatttgttaaaagtgttagcaga
gcagctgagcttgacaaactacttgtggagtgcaacttcccatcaatatgtattcattct
ggaatgtcccaggaagaaaggttaaagcgatacaaaggttttaaggagggccacactagg
attcttgtggctacagatttggtcggtaggggaattgacatcgaacgtgtgaacatagtt
ataaactatgacatgcccgattctgcagacacttacttgcacagagtaggtcgagctgga
aggtttggcacgaagggcctagcaattacatttgtttcatgtgctaatgacgttgatgtc
ctcaacaatgttcagtccaggtttgaggttgatattaagcaacttcctgagcagattgat
acctctacctacatgccatcttga
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