Arachis duranensis: 107495753
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Entry
107495753 CDS
T04300
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
adu
Arachis duranensis
Pathway
adu03015
mRNA surveillance pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107495753
09123 Folding, sorting and degradation
03018 RNA degradation
107495753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107495753
03041 Spliceosome [BR:
adu03041
]
107495753
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107495753
mRNA cycle factors
Stress granule specific factors
107495753
Spliceosome [BR:
adu03041
]
Complex C
Other components
Complex C specific factors
107495753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
RBD_DEAH11
RRM_Nup35
RRM_7
YflT
RRM_RdRP1_2
RRM_MARF1
RBD_DGKtheta
DUF5062
RRM_8
Motif
Other DBs
NCBI-GeneID:
107495753
NCBI-ProteinID:
XP_015972401
UniProt:
A0A6P4DXI3
LinkDB
All DBs
Position
6:109107888..109112426
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AA seq
651 aa
AA seq
DB search
MAQIQVQHQSAVSAPPQNGVAAAPSPPLPVGAANGTNQFVTTSLYVGDLDPEVDERHLYD
LFNQVGQVVSVRVCSDLTTRRSLGYGYVNYSNPQDAARAIDVLNFTPLNNKPIRIMYSYR
DPSIRKSGTGNIFIKNLDKAIDHKALHDTFSSFGHILSCKIATDASGQSKGYGFVQFDTE
ESAQNAIDKLNGMLINDKQVYVGHFLRKQDRDNALGKTTFNNVYVKNLSESVTDDDLKKI
FGEYGTITSAVVMRDAYGRSKCFGFVNFENPEDAAKAVESLNGKKIDDKEWYVGKAQKKS
ERENELRRRFEQTVKESVDKYQGVNLYLKNLDDTINDEKLRELFSEFGSITSCKVMRDPN
GISRGSGFVAFSTPEEASRALTEMNGKMIAGKPLYVALAQRKEERRARLQAQFSQMRPVA
MTPSVAPRMPLYPPGAPGLGQQFMYGQGPPAMIPPQAGFGYQQQLVPGMRPGGAPMPLAE
LNKFFXNKLAVLXNLLFSINLFPQLLPRGRYMRYPPGGRNMQDVPLPGVAGGMLSVPYDI
GGLPIRDGVGQPVGIQALATALANAPPEQQRTMLGEALYPLVDQLEHDAAAKVTGMLLEM
DQPEVLHLIESPDALKAKVAEAMDVLRNVSQQANTPADQLASLSLNENLVS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattcaggtgcagcaccagagcgcggtttcggctccaccgcagaacggcgtc
gcagccgctccttcgccgccactgccggtgggtgctgcgaatgggacgaaccagtttgtt
acgacgtcgttgtacgtcggggatctagaccctgaggttgacgagaggcacctctacgat
ttgttcaaccaggtcgggcaagtggtctcggttcgtgtctgcagtgatttgaccactcgc
cgatcgctcggttacggttacgttaattacagtaaccctcaggatgctgcacgagcaata
gatgtactgaatttcactccactgaacaacaagcccattaggatcatgtattcttatcgg
gatcctagcattcgcaagagtgggactggaaacatttttatcaagaatttggataaagca
attgatcacaaagctttacatgatactttttcttcttttggacatattctttcttgcaaa
atagcgactgatgcttctggccagtcaaaaggctatggttttgttcaattcgacaccgag
gagtctgcacagaatgcaatcgataagttaaatggcatgctgatcaatgataagcaggtc
tacgtgggtcatttcttacgtaagcaagatagagataatgctttgggtaagacgacattc
aataatgtgtatgtgaaaaacctgtctgagtcggtgacagatgatgacttgaagaaaatt
tttggagagtatgggacgatcactagtgctgtagtaatgagagatgcatatggtagatca
aagtgttttgggtttgttaattttgaaaacccagaagatgctgccaaagctgttgagtca
ctcaatggaaagaaaattgatgacaaggagtggtatgttggaaaagcccagaaaaaatct
gagcgagagaatgagctgagaagacggtttgagcaaactgttaaagaatctgttgataaa
taccaaggtgtgaacttgtatctcaagaacttggatgataccatcaatgatgaaaagcta
agagaactcttctctgagtttggttcaataacctcttgcaaggttatgcgcgatccaaat
ggaatcagtagaggatcaggatttgttgcattttcaactcctgaggaagcatctcgagct
cttacggagatgaatggtaaaatgattgctgggaagcctctgtacgttgcccttgctcag
agaaaggaagagagaagagctaggttacaggcacaattttcacaaatgaggcctgttgcg
atgacaccttctgttgcaccacggatgccactttatcctcctggtgctcctggtttaggg
cagcaatttatgtacgggcaaggacccccagccatgattcccccacaggctggatttggc
taccagcagcaacttgttcctgggatgaggcctggtggtgctccaatgcctttagctgaa
ctaaacaagtttttctaaaacaagcttgctgttttataaaacttacttttctctatcaat
ttgtttcctcagttgcttccaaggggacgctatatgcgttaccctcctgggggtcgcaat
atgcaagatgttccactcccaggggttgccggaggaatgttgtcagtcccctatgacata
ggtggtcttccaatccgcgatggtgtagggcagccagttggaattcaggccttggctact
gctcttgcaaatgctcctcccgaacagcagaggactatgcttggtgaagctttgtacccg
ctagtggaccagctggagcatgatgcagctgctaaagttacaggcatgctattggagatg
gatcagccagaggtattacacctgattgaatcaccagatgctctcaaggcaaaagttgcc
gaggcaatggatgtgttgagaaatgtttctcaacaagccaacacccctgccgatcaactc
gcctcactctccttgaatgagaatcttgtctcttag
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