Arachis duranensis: 110272363
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Entry
110272363 CDS
T04300
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110272363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
110272363
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110272363
mRNA degradation factors
5'-3' decay
Decapping complex
110272363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_HPS5
PEP5_VPS11_N
FlgN
Motif
Other DBs
NCBI-GeneID:
110272363
NCBI-ProteinID:
XP_015931799
UniProt:
A0A6P4AW39
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Position
1:4295735..4323935
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AA seq
1254 aa
AA seq
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MALLTNHDQQQQQQPQPPPQLPQQSSQPLSASAPISSMGMLSAANAAAAALNRVASSKVP
RGRRLAGDHVVYDVDVRLPGEVQPQLEVAPITKYGSDPNLVLGRQIAVNKSYICYGLKQG
NIRVLNIHTAVRSLLKGHNQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQ
ITANIVIAIQMVGEEKVENPRICWHCHKQEILIIGMGRHVLRIDTTKVGNGEAFVTEDTL
RCPLDKLIDGVQLVGTHDGEVTDLSMCQWMRNRLVSASHDGTIKIWEDRKTQPLAVMRPH
DGHPVFSATFFTAPHRPDHIVLITGGPQNREVKLWVSASEEGWLLPSDAESWKCTQTLEL
RSSAQPSVKDSFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGSNPESTRMDYIAEFTVT
MPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPFENVGLEKPDSSVSRD
ADGFSTVDSSGVRASEMSSASSASKTMSQGGSTESALAGRYPLSSGYIEGPTSAPSSSDA
DIVCVPSPPLPLSPRLSRKLSDFRSSQSNLGDHVGDQSINDYSVDRQMPTIHRNLSDAPL
MNNDLKNDEKVKQDDISSVLNPSVMFKQPTHLVTPSEIIKAGSPPETNIIDRNSEGDTKI
PDVVDLGNAEVEVKVVGEATPDQSDEYNHQGSQQNLLSDVKEKYFCSQASDLGIEMTREC
CAISGGTYITGEPGQVDLSLGESLSQTSNAGEDGLQDSTKDVHEKISNSSASMTVPPSPA
PNTKGKRQKGKNSQASSPSSPSPSACNSVDLSNEVGGSSNLPSAENAFHQILAMQESINQ
LLTMQKEMQKQMTMMVTVPVTKEGRRLEAALGRTMEKAVKANMDALWARIQEENAKNEKL
LRDRIQHVTGLISNFMNKDLPAILEKILKKEIASVGPAAVRAMTPTIEKIISSAIVDSFQ
RGVGDKAVNQLDKSVNAKLEATVARQIQAQFQTTGKQVLQDALKSSFEISVVPAFEKSCK
AMFDQVDSTFQKGMVEHSTSVQQRLESGHTSLAMTLRESINSASSVTQTLSREVLEGQRK
LMAYATAGANSGTLNPLPIQLNNGPLLREKVEVPLDPKQELARLIAERKFEEAFTGALQR
SDVSIVSWLCSQVDLHGLLSMVPLPLTQGVVLSLLQQLACDINNDTSRKIAWMTDVAAAI
NPSDPMIAMHVRPIFEQVYQILNHQRSLPTMTGPDLSSIRLLLHVIHSMLMTCK
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggccctcctcaccaaccacgaccaacaacaacaacaacaaccgcaaccgccaccgcaa
ctgcctcaacaatcttctcaaccgctttcagcttccgcccctatctcctcgatggggatg
ttatcggccgcgaacgctgcggcagctgcgctgaatcgcgtggcgagcagtaaggtgccg
agagggaggcgcctggcgggggaccatgtggtgtatgacgtggacgtgaggcttcccggg
gaggtgcagccgcagcttgaggtggcgccgataacgaaatatggttcggatcctaacttg
gttcttggaaggcaaatagctgttaacaagtcttacatttgctatgggttgaagcaaggg
aacattagagtgcttaatattcacacagctgttaggtcccttctcaaaggccataatcag
agggtcacagacttggctttctttgctgaagatgttcatctcctggctagtgttggaaca
gatggccgtgtctttgtgtggaagatctctgaaggtcctgatgatgaagataagcctcaa
attactgccaatattgttatcgctatccaaatggtgggagaggagaaagttgaaaatcct
cgaatctgctggcactgccacaaacaagaaattttgataattggtatgggaagacatgtt
ctaagaattgacaccacaaaagttggaaatggtgaggcctttgtgacagaggacactctg
aggtgtcctcttgacaagctcatagatggtgttcagctggtgggcactcatgatggagag
gtgactgatttgtcaatgtgccaatggatgagaaatcgtctggtatctgcatcacatgat
ggcacgataaagatctgggaagatcgcaagacacagccacttgcggtgatgagaccacat
gatgggcatcctgttttttctgctacatttttcactgctccccaccgacctgatcatatt
gttcttataactggtggacctcaaaatcgggaagttaagctttgggtctcagcaagtgaa
gaaggttggctacttccaagtgatgctgaatcatggaaatgcacgcagacattggagttg
aggagttcagctcaaccatctgttaaggactcattctttaatcaagttgcagcattgtct
catgcaggtctgcttttacttgcaaatgctcagaggaatgctatatatgctgtacactta
gaatatggttctaatcctgaatcaacacgcatggattatatagctgagtttactgtgacc
atgcccattctgagttttactgggacaagtgatatattacctcatggtgaacatattgtt
caggtttattgtgttcaaacacaggccattcagcagtatgctttggatttagcccaatgc
ctgccaccaccatttgaaaatgtgggactagagaagccagattcctctgtttcccgagat
gctgatggattcagtactgtggactcatctggtgttagagcatctgaaatgtcgtcagcc
agttctgcttccaaaacaatgtcacaaggtggtagcactgagagtgcacttgctggaaga
taccctttaagctctggctatattgagggacctacttcggctccatccagtagtgatgct
gatattgtttgtgttccatctccgcctcttcctttgagcccaaggttgtctaggaaactg
tctgatttcaggagttcacaatctaatttgggtgaccatgttggggaccaatccattaat
gattattcagttgacagacaaatgcctactattcataggaacttgtctgatgcaccactg
atgaataatgatttgaagaatgatgagaaagtcaaacaggatgatatttcgagcgtactt
aatccctctgttatgtttaagcaaccaactcacctggttactccttctgaaatcattaag
gccggttctccccctgagacaaatataattgatagaaatagtgaaggagatacaaagatc
ccagatgtggttgatttgggtaatgctgaagtagaagtgaaagtggtcggtgaggctaca
cctgatcagagcgatgagtataatcatcagggatcacaacaaaacctactttctgatgtt
aaagaaaaatacttttgctctcaggcttcagatcttggtattgagatgacgcgagaatgc
tgtgcaatatcagggggaacttatattacaggggaaccagggcaagttgatctcagttta
ggggaatcactttcccaaacttctaatgctggtgaggatggactgcaagactcgacaaaa
gatgtgcacgaaaagatttctaactcatctgcatccatgacagtaccaccttcacctgca
cctaacacaaaagggaagagacagaagggcaaaaattctcaagcatctagtccatcttcc
ccatctccaagtgcatgcaattcagttgatttgtcaaatgaagtaggtggaagttcaaac
ctcccatctgctgaaaatgcatttcatcaaattctagcaatgcaagaatcaattaatcag
ttattgactatgcaaaaagagatgcagaagcaaatgacaatgatggttacagttccagtt
acaaaagaaggtagaaggcttgaggcagccctggggagaactatggaaaaagctgtcaag
gccaatatggatgctttgtgggctcgaattcaagaggagaatgcaaaaaatgaaaagttg
ttacgagatcgtattcagcatgttacaggtttgattagtaactttatgaataaggatcta
ccagcaatattggagaaaatactaaagaaggaaatagcttcagtgggtccagctgcagtc
cgtgcaatgacccccactattgagaaaataatatcttcagccattgtagattctttccag
agaggagtaggtgataaggcagtaaatcaacttgataaatcagtcaatgcaaaacttgaa
gccactgttgccaggcaaattcaagcacagtttcagacaactggaaaacaagtgcttcag
gatgcactcaaatccagttttgaaatatcagtggttcccgcgtttgagaaatcatgcaaa
gcaatgtttgaccaagttgattctacatttcaaaagggcatggttgaacattcaacttca
gtgcaacaacgccttgaatctgggcacacttcactggcaatgactctaagggaatccatt
aactcagcttcatcagttactcaaactttgagtagagaagtgctagagggccagagaaag
ctaatggcatatgcaactgcaggagccaactctggcacactaaatcctttgcccattcag
ctgaacaatggacctctgcttcgtgaaaaggttgaagtgcctctcgatcccaaacaagag
ctagcaaggttgatagctgaacggaagtttgaggaagctttcaccggggctctacaaaga
agtgatgtgtcgattgtatcttggttatgttctcaggttgatttacatggacttttgtca
atggttcctcttcctttgacccaaggagtagtgctttcacttctgcagcaactggcatgt
gatattaacaatgatacctcacgaaagattgcatggatgacggatgtggctgccgccatt
aatccctcagaccccatgattgcgatgcatgtgcgacccatatttgagcaagtttatcag
atactgaatcatcaacgtagcttgcctacaatgactggacctgatctttcaagcatccgt
cttttattgcatgtcatccactctatgctgatgacatgtaaatga
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