Arachis duranensis: 54695931
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Entry
54695931 CDS
T04300
Symbol
rpoA, HJD64_pgp031
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
adu
Arachis duranensis
Pathway
adu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
54695931 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
54695931 (rpoA)
03400 DNA repair and recombination proteins [BR:
adu03400
]
54695931 (rpoA)
Enzymes [BR:
adu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
54695931 (rpoA)
Transcription machinery [BR:
adu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
54695931 (rpoA)
DNA repair and recombination proteins [BR:
adu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
54695931 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
54695931
NCBI-ProteinID:
YP_009766873
UniProt:
A0A6H0E7M1
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Position
Pltd:complement(78754..79740)
Genome browser
AA seq
328 aa
AA seq
DB search
MVREKIRVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT
CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICIKGPGYVTAQD
IILPPSVEIVDNTQHIANLIEPINLCIRLQIERNRGYCIKRLKNFQDGSYPIDAVFMPVR
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAGEENFKLE
KNQHKVTLPGFTFHDTLAKLRKNKKEIELKSFFIDQLELPPRIYNCLKRSNIHTLLDLFN
TSHENLMKIEDFRIEDVKHILNILEIRN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaaattagagtatctactcgaacactacagtggaagtgtgttgaatca
agagtagacagtaagcgcctttattatggacgctttattctgtctccacttatgaaaggc
caagctgatacaataggcattgcgatgcgaagagttttgcttggagaaatagagggaaca
tgtatcacacgtgcaaaatctgagaaaataccacatgaatattcgaccatagtaggtatt
caagaatcagtacatgaaattttaatgaatttgaaagaaatagtattgagaagtaatctg
tatgggactcgagacgcatctatttgtatcaagggtcccggatatgtaactgctcaagac
atcattttaccaccttctgtggaaattgttgataatacgcaacatatagctaacctaata
gaacccattaatttgtgtattagattacaaatcgagaggaatcgcggatattgtataaaa
agactaaaaaactttcaagacggaagttatcctatagatgcagtattcatgcctgttcga
aacgcaaatcatagtattcattcttatgtgaatgggaatgaaaaacaagaaatactcttt
ctcgaaatatggacaaatgggagtttaactcctaaagaagcgctttatgaagcctcccgt
aatttgattgacctatttattccttttttacatgcgggagaagaaaactttaaattagaa
aaaaatcaacacaaagttactttacccggtttcacttttcatgatacattggctaaacta
agaaaaaacaaaaaagagatagaattaaaatctttttttattgaccaattagaattgcct
cccaggatctataattgtctcaaaaggtccaatatacatacattattggacctttttaat
accagtcacgaaaaccttatgaaaatagaagattttcggatagaagatgtaaaacatatc
ttgaacattttagaaattcgaaattga
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