Acinetobacter defluvii: DJ533_04430
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Entry
DJ533_04430 CDS
T05474
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
adv
Acinetobacter defluvii
Pathway
adv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DJ533_04430 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adv03021
]
DJ533_04430 (rpoC)
03400 DNA repair and recombination proteins [BR:
adv03400
]
DJ533_04430 (rpoC)
Enzymes [BR:
adv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DJ533_04430 (rpoC)
Transcription machinery [BR:
adv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DJ533_04430 (rpoC)
DNA repair and recombination proteins [BR:
adv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DJ533_04430 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AWL27884
UniProt:
A0A2S2FA95
LinkDB
All DBs
Position
435560..439753
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPLEKYQLLNDEEYFTALEEHGDE
FSAKMGAEAVQDLLKDIDLEAEITRLREEIPNTTSETKLKKASKRLKLMEAFNDSNNKPE
WMVLTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPSLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPIMLNRAPTLHRLGLQAFEPTLIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAINAKGEGMVFADTHEVNR
ALATGQVDLHARVKARVHQTVIDENGNREHQTIVVDTTPGRCLLWEVVPEGMDFQQINVE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMVIPPQKQAIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSFTTVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTYDGLVMTPFIQGGDVIEPL
SQRVLGRVTAEDVKKAGSDDVILPRNTLIDEKLAQYLEDAGVDEVKVRSVVSCASTFGVC
AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILIKDGEAVEGGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVQENQAILAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDELRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHELVND
FSEVDQAFSQALNEDTF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgcaaaaagacggattcagacggtcatgctcctgta
gagtttgatcgcatccgtattggtcttgcgtcaccagaaatgattaagtcatggtctcat
ggtgaagttaaaaaacctgagacaattaactatcgtacgtttaaaccagaacgtgatggt
ttattctgtgccaaaatctttggtccggtcaaagattatgaatgcttgtgtggtaaatac
aagcgtatgaaatataaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaactgcg
aaagttcgccgtgaacgtatgggtcacattgagcttgcatctccagttgcacatatttgg
ttcttgaaatcattaccaagccgtattggcttgcttttagatatgactttacgtgatatc
gaacgtgtattgtatttcgaatcttatgtggtaacagatccgggtatgacaccgcttgaa
aaatatcaacttcttaatgatgaagagtattttacagcgttagaagaacacggtgatgaa
ttcagcgcgaaaatgggtgctgaagcagttcaagatttgttgaaagacatcgatcttgaa
gctgaaattacacgtcttcgtgaagagattccaaatacaacgtctgagacgaagcttaaa
aaagcctctaaacgtttgaaattgatggaagcattcaacgattcaaataataagcctgaa
tggatggtgttaactgtacttccagttcttccaccagatcttcgtccacttgtaccactt
gaaggtggtcgttttgcgacgtctgacttgaacgatttgtatcgtcgtgtgatcaaccgt
aacaaccgtttgaaacgtcttcttgatcttgcagcaccagacattatcgtacgtaacgaa
aaacgtatgttacaagagtctgtagatgcattgttggataacggtcgtcgtggtcgtgca
attactggttcgaacaaacgtccgcttaaatctttggcagatatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacttgcttggtaagcgtgttgactactctggtcgttcggtaatt
acagtaggtccatcattacgtttacaccaatgtggtcttccgaagaaaatggcacttgaa
ttgttcaaaccatttatctttgcgaaactacaagcttcaggtcaagcaaccaccattaaa
gctgcgaagaaaatggttgagcgtgaaacaccagaagtttgggacgttctagcatctgtg
attcgtcaacacccaatcatgttgaaccgtgcgccaacacttcaccgtctaggtcttcaa
gcatttgaaccgaccttgatcgaaggtaaagcgatccgtctccaccctctcgtatgtgct
gcgtttaacgccgacttcgatggtgaccaaatggcggtacacgtaccattaacactcgaa
gcacagttagaagcacgtgcgttaatgatgtcaaccaacaacatcttatcacctgcaaat
ggtgagccgatcatcgtaccttctcaggacgtggttttgggcttgtattacatcacacgt
gatgcaatcaatgccaaaggtgaaggcatggtgtttgcggatacgcatgaggtaaaccgt
gcgttggcaacaggtcaagtggatttgcatgcgcgcgttaaagcacgtgtacatcaaact
gtaattgatgaaaatggtaatcgtgagcatcaaaccattgttgtagacacaacaccaggt
cgttgcttactttgggaagttgttcctgaaggcatggatttccaacaaattaatgtggaa
atgaccaaaaagaacatttctaagttaattaactcttgctaccgtaaactcggtttgaaa
gatacggttatctttgctgaccaattgatgtacttgggcttccgtcaagcaacacgttca
ggtgtttctgtcggtatggaagacatggttattccaccacaaaaacaagcaattatcgac
aaagcagaaactgaagttcgtgaaattgaacaacagttcgagcaaggtttcgtaactgcg
ggtgaacgttataacaaagtggtcgatatttgggcgcgtaccaacgaccaagttgcaaaa
gccatgatggataacttgtcatttaccactgttaaaaacaaacagggtgaagacgagaaa
caaaagtcattcaacagtatctacatgatgtctgactctggtgcccgtggttcggcagca
cagattcgtcagcttgcaggtatgcgtggtttgatggcgaaaccagatggttcgatcatt
gaaacaccgattaaagcaaacttccgtgaaggtttgaccgtacttcagtacttcatctcg
acgcatggtgcacgtaaaggtttggcagatactgcacttaaaactgcgaactctggttac
ttgacacgtcgtttggttgacgtggcacaagacttagtgatcactgagccagattgtggt
acttatgatggtcttgtcatgacaccattcattcaaggtggtgatgttattgagccatta
agtcaacgtgtattaggtcgtgtaaccgctgaagatgtgaaaaaagcaggttcagatgat
gttattctgccacgtaatacgttaattgatgagaaacttgctcaataccttgaagatgct
ggtgttgatgaagttaaagtgcgttcagtggtgagctgtgcatctaccttcggtgtatgt
gcgaagtgttatggtcgtgaccttgcacgcggtcacttggtgaatccaggtgagtctgtc
ggtgtaatggctgctcaatctattggtgagccaggtacccagttaaccatgcgtaccttc
cacgtcggtggtgctgcgagccgaacttctgctgcaaatagtgttcaagtgcgtaataaa
ggtacagtacgtttccataatgtgaaaactgtacaacatgccaaaggtcacttggtatct
gtttcacgttcaggtgaaattggtattgcagatgacttaggtcgtgaacgtgagcgttat
aaacttccgtatggtgcaagcatcttgattaaagatggtgaagctgtagagggggggggt
atcgttgcaacttgggatccgcatacacatccattggtaacagaagttgcgggtaaagca
cgtttcagtcaaatcgctgatggtgtaactgcaacctcgaaaactgatgatgcaacaggt
atgaccactgttgaaatcttaccagtgactgcacgtcctgcatctggtaaagatttacgt
cctgcgatcgtgttggatacaaccgatggcggagaacagttctacttcttgccacaaaac
acaatcgtaactgtccgtgatggtgaaacgattggtgtcggtgatgttattggtcgtgtt
ccacaagaaacgtcacgtacacgtgatattaccggtggtttgccacgtgtagctgacttg
ttcgaagcacgtaagccgaaagagcatgcgatccttgcagaagtgtctggtatcgtcagc
ttcggtaaagaaaccaaaggtaagaaccgtttagtgatcacaccggatgatggttctgag
atctacgaagagttgattccaaaatggcgtcaaatcaacgtgtttgaaggcgagcatgtg
aatcgtggtgaaaccatttctgatggtccacaaaacccacatgacatcttacgtctgaaa
ggtgaagttgcattaaccaattacatcgtgaatgaagttcaagatgtataccgtttacaa
ggtgtaaaaatcaacgataagcacattgaagtcatcgtacgtcaaatgttgcgtaaagtt
gatatcactgacggtggtgatacgagcttcatcaaaggtgagcaagtggattacatccgt
gttgttcaagagaaccaagcaatcttggctcagaacaagttccctgcgaagtttgaacgt
caattgatgggtatcaccaaagcatcgctttctacagactcgttcatctctgctgcatcg
ttccaggaaacaacacgtgtgttaactgaagcggctgtaacaggtaaagaagatgaatta
cgtggcttgaaagaaaacgtggttgtaggtcgtctgatcccagcgggtacaggtttggct
tatcacttagaacgtcgtcgtcaagaagctgaagctgctgaacatgagcttgtaaatgat
ttctctgaagttgatcaggcattctcacaagctttaaatgaagatactttctaa
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