Acinetobacter defluvii: DJ533_04515
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Entry
DJ533_04515 CDS
T05474
Name
(GenBank) AAA family ATPase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
adv
Acinetobacter defluvii
Pathway
adv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DJ533_04515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adv03400
]
DJ533_04515
Enzymes [BR:
adv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DJ533_04515
DNA repair and recombination proteins [BR:
adv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DJ533_04515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
NPHP3_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AWL27900
UniProt:
A0A2S2FAG0
LinkDB
All DBs
Position
457094..460846
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AA seq
1250 aa
AA seq
DB search
MHPVSPPKNQLNAPKKVSIQPIADMQFAGLHWIEASAGTGKTYTLSSLMVRIFLEKYLPN
QVIATTFTRKAAAELKSRIRARLQETYRYFDGCRSLTEQEILAKAAQENDPLFAKVLVTF
ATQTAYACERLKLVIDQLDELFVGTLDSFSQKLLREFAFESGKIERAEITDDAKSYTFQL
IHDVLREWIQKQPQNMIDYLILNKKLKSQDVYVAVVENSLNFTSAKLQEIQPPHIDLSQF
DQEVQDLLTLDVTQIESLSDFYLENGQHHKIIGKKWRDHGRIQSLLTEQLPRLIAAIRQQ
GIYSIFVAQHADTLKALSELTTKKVLNKCSEDILQSFEQNAVILNLKQFIEALTQLRGDL
DTLDSYLQFHLASEVKKRLPQVLQQKGETTFAQQIRTLAESLQGEQGQRFASFIHARYPL
ILVDEFQDTNQDQDDMLAQIWRHPSRVKNGCMIMVGDRKQAIYGFRGGDMLTFLKAHQDV
FGKDGNAYNLVYNHRSVQPLVEVIDALFQRQTDFGEQVFYTPVQAGSRPHPDLIDHGQIN
PTPLRWLQLEDKNTEAEQVAWKIRDLLNQAIQGELYFQEKNGNRALDENDIAILSKNHDG
LDKAQSALAFLGIRTNRPAKKSVFSSALAQDVGAVLTAIMYPYDEAKVKRALLSRLMGFD
LKKLIKLEQKAEGLSHYIEQFDLIREMWLKQGFLTAWQYALTKFKVWTNLVAKQSRDNER
VVVNLRHLTELLSQHSERYQGAQNLYHWYLKQLTSPMEREWELERKLSNDAGVQLMTIHQ
SKGLEFKIVFLLGADKDFREPNKSLNFSTQETLNPQTGQIEQQRVVAVNDKNILKPEAIQ
QHDERALAEHHRLWYVALTRASYRVYAMMQDDAGKSTTGLAFWRGHPAQSFQHVGCVVED
LLTQRPVALKAKVIENFEAIEAMPLPNMRFYSRTKTSFSALAQHLTRQQIQDALAVTEPS
SAVAEDESYIHPRIKTAQQATVPIAWIKDNFPMGTTAGTFLHKIFEHLDFQNPETWTTEL
KRRFANEDQKLKNELLEKYQKVFAEPQDEKDIEPILIQMMQDWLLDVLDTPILDDFKLKK
LSHTQRLAEFPFHLALADRVLTIQRIHALFAEYDIQMPEFKDAFAARYLKGEIDLVFYDG
QKFHIADYKSNYLGADQQQYSSTAIQESMSFASYWLQAALYLVALHRYLSVKLENYQIDQ
HLGGASYLYLRGMNGQEGQGYHYWRPNSEFILRLDAILGYFAEDKLSNIA
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgcacccagtttcaccaccgaaaaaccaattaaatgcgcctaaaaaggtatccattcaa
cccattgcagacatgcagtttgcaggtttacattggatcgaggcatctgcagggacaggc
aaaacttatacactttcaagtttaatggtgcgtatttttcttgaaaaatatttacctaat
caagtgattgcaaccacttttactcgtaaagcagctgccgagttaaaaagccgtattcga
gcaagattacaggaaacttatcgttattttgatgggtgtcgtagtctgacagaacaagag
attcttgctaaagctgctcaagaaaatgacccgctgtttgccaaagttttagtgacattt
gcgacacaaactgcttatgcctgtgaacgtttaaagttggtgattgatcagttggatgaa
ttatttgttgggactttagacagctttagccaaaaactgttacgtgaatttgcctttgaa
agtggcaagatcgaacgtgccgaaattaccgatgatgcaaaaagttatacgtttcaactc
attcacgatgttttgcgagagtggattcaaaagcaaccgcaaaatatgattgattattta
atcttaaataaaaaactcaaatctcaagatgtgtatgtagcagtagtggaaaatagtctg
aatttcacctcagccaaattacaagaaatccagccgccacacattgatctttcacaattt
gatcaggaggttcaggatttattgacactggatgtaacccagattgaaagtttgtctgat
ttttatttagaaaatgggcaacatcataagatcattggtaaaaaatggcgagatcatggc
agaatacagtcacttttgactgagcagctaccgcgcttgatcgctgcaattcgtcaacaa
ggtatctatagcatctttgtcgcacaacatgcagataccttaaaagccttaagtgagttg
accaccaaaaaagttttaaataaatgttctgaggatattctgcaaagttttgaacaaaat
gcggtgatcctgaacttaaaacaatttattgaggcattgacacaactccgtggtgatttg
gacacactagacagttatttgcaatttcatctggcaagtgaagtcaaaaaacgtttgcca
caagtgcttcaacaaaaaggtgaaaccacttttgcccagcaaattcgtacacttgctgag
tcattacaaggtgaacaagggcagcgttttgccagttttattcatgcacgttatcccttg
attcttgtggacgagttccaagataccaaccaagaccaagacgatatgttggcacagatt
tggcgtcatccgagtcgggtgaaaaatggatgtatgatcatggtgggtgaccgtaaacaa
gcgatttatggtttccgtggtggcgatatgttgacctttttaaaagcacatcaagatgtg
tttggcaaagacggaaatgcctacaatttggtctataatcatcgctctgttcagcctttg
gttgaagtgatagacgcattattccaacgtcaaaccgattttggtgagcaagttttctat
acgccagtacaagcaggaagtcgcccacatccagacttgattgatcatggacagattaat
cctacacctttacgttggttacagttagaggataaaaataccgaagcggaacaagttgct
tggaagattcgggatttgctgaatcaagccattcagggtgagctttactttcaagaaaag
aatggcaatcgggctttagatgaaaatgatattgcgattttatctaaaaatcatgatggt
ttagacaaagcacagtctgccttagcatttttagggattcgtaccaatcgacctgctaaa
aaaagtgtatttagtagcgcacttgctcaagatgttggcgcagtattgactgctattatg
tatccttatgatgaagccaaagtcaaacgggctttactgagtcgcttaatgggatttgac
ttaaaaaaactgattaaacttgagcaaaaagccgaaggtctaagtcattatattgaacaa
tttgatttgatccgtgagatgtggctaaaacaaggctttttaacagcttggcaatacgcc
ttgaccaagtttaaggtttggacaaatttagttgctaaacaaagccgtgataatgaacgt
gttgtggtgaatttacgtcatttaactgaactgttgagccagcacagtgagcgctatcaa
ggcgcacaaaatctctatcattggtatttaaagcaactgacttcaccgatggaacgagaa
tgggaattagagcgtaaactgtcaaatgatgcaggtgtacagctgatgaccattcaccag
tccaaaggtttggagtttaaaatcgtatttttattgggtgcggataaggactttcgtgaa
cccaataaaagtttaaatttttctactcaagaaactttaaatccccaaacaggacagatt
gaacaacaacgtgttgtggctgtgaatgataaaaatattttaaaacctgaggcgattcaa
cagcatgacgaacgtgcgttggcagagcatcatcgtctttggtatgtggcactgacacgt
gccagctatcgtgtgtatgccatgatgcaagatgatgctggaaaatcaactacaggctta
gcattttggcgagggcatcctgcgcaatcttttcagcatgtgggttgtgttgtagaagat
ttattgacccaacgaccagttgcgcttaaagccaaagtgattgaaaactttgaagcaatc
gaggcaatgccactgccaaatatgcgtttttattctagaactaaaaccagttttagtgct
ttggcgcaacatctgacgcgtcagcaaattcaggatgccttggcagtgacagagccgagc
agtgcggttgcagaagatgaaagctatatccatcctcgtattaaaacagctcagcaagca
actgtaccgatcgcatggattaaagataattttccgatgggaacaacggcgggaacattt
ttacataagatttttgaacatcttgattttcaaaatccagagacatggacgactgaactg
aaacgccgttttgccaatgaagatcaaaagctgaaaaatgaattgcttgagaaatatcaa
aaagtatttgctgagccacaagatgaaaaagacattgaacctatattgattcagatgatg
caagattggttgctggatgtcttagacacaccgattttggatgattttaaacttaaaaaa
ctcagtcatactcagcgcttagccgaatttccatttcatttggcattggcagatcgggtg
ctgactattcaacggattcatgctttatttgctgagtatgatattcaaatgcctgagttt
aaggacgcttttgctgcacgttacttaaaaggtgaaattgatcttgtattttatgatggt
cagaaatttcatattgccgattataaaagtaactacttaggtgctgatcagcaacaatat
agcagtactgcgattcaggagagtatgagttttgccagttattggctacaagcagcgttg
tatctcgtggcattgcatcgttacctcagtgttaaattagaaaattatcagattgatcaa
catttaggtggggcaagttatttgtatttaagaggcatgaatgggcaagaaggacaaggc
tatcattattggcgaccaaattcagaatttattcttcgattagatgcaatattgggctat
tttgctgaggataaacttagcaatattgcatga
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