Acinetobacter defluvii: DJ533_05965
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Entry
DJ533_05965 CDS
T05474
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
adv
Acinetobacter defluvii
Pathway
adv02020
Two-component system
adv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
adv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DJ533_05965
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DJ533_05965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adv03021
]
DJ533_05965
Transcription machinery [BR:
adv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DJ533_05965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
FtsX_ECD
IL7
HTH_IclR
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AWL28154
UniProt:
A0A2S2FB13
LinkDB
All DBs
Position
748418..749866
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AA seq
482 aa
AA seq
DB search
MKLSVGLKVANTLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEEESSIESLQ
QLQEQESKDLTKELNADHLPDDLPVDTDWDEVYTHQSTAMERPEFEEREDNRQGHTSLKE
HMLAQINLLHFSPVDKLTAYCIVDALDEKGFLDAEISEIVQSVTHLLTQMNYDVELEEDE
VLVVLKHIQRLDPVGVGSRHLAECLSLQVDVLPNETAYKNEALALLKHYELLVSNELPKL
LKQTGLNAEQLKSAVDLLKTLKAYPGVEFAEKDVDYQIPDVVVSKKNDAWHVQLNPDVMP
KLRVNSFYANMIRRADQSEDNQYLRNQMLEAKNFIKSVDERHKTLLKVATCIVQHQREFL
EVGAEGMKPLVLREVAEEVELHESTVSRVTTNKYLLTPRGLFELKYFFSSHVGTTSGGEA
SSTAIRAKIKKLVAEENPRKPLSDNTIANLLKEDGIDVARRTVAKYRESLNIPSSSDRKV
LI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcggtcgggttaaaagttgcaaatacgttgtcattaacgccacaattgcaa
caggcgattcgattattacaactttcaagtttagaattagaacaagaaattcaaatccaa
ctcgacagtaatcctctacttgaaaaagttgaggaagaatcctctatagaaagtctgcag
caattacaagaacaagagtccaaagacttaactaaagaattaaatgcggatcatttacct
gatgatttgcctgtggatacagattgggacgaggtttatacccatcaatcaactgcaatg
gaacgtccagaatttgaagagcgtgaagataatcgtcaagggcatacctccttaaaagag
catatgttggcacagattaatttactgcacttttcacctgtagataagttaaccgcgtat
tgcattgtagatgctttggacgaaaaaggctttctagatgctgaaatttcagaaattgta
caatcagtgactcatcttttgacccagatgaactatgacgttgaacttgaagaagatgaa
gtcttggttgtgcttaagcatattcagcgcttagacccagtaggggtaggttcacgtcat
ttggctgaatgtttgtcattacaagtcgatgtcttgccaaatgaaaccgcatataaaaat
gaagcactagcattattaaagcattatgagcttttggtgagtaatgaattgccaaaatta
ctcaaacaaacgggtttgaatgcagagcagttaaagtctgcggtagacttattgaagact
ttaaaagcttatcctggtgttgaatttgcggaaaaagatgttgattatcaaattccagat
gtggtggtatctaagaagaatgatgcttggcatgtacaacttaatcctgatgtgatgcct
aaattaagagtaaatagtttttatgccaatatgattcgtagggcagatcaaagcgaggat
aatcaatatttacgtaatcagatgttggaagctaagaactttataaaaagtgtagatgag
cgtcataaaaccttattgaaagtagcaacttgtattgtgcaacatcaacgtgagtttttg
gaagttggtgcagaagggatgaaacctttagtacttcgagaggttgcagaagaagtggag
ctacatgaatcaacagtatcgcgtgtcacgaccaataaatatttacttacccctcgtggt
ttgtttgagctgaaatatttcttttcaagtcatgtggggacaacatcaggaggcgaggca
tcttcaactgcgattcgagcaaaaattaagaagctggttgcagaagaaaacccacgtaag
cccttgtctgataatacaattgcaaatttgttgaaagaagatggtattgatgttgcacgc
agaacggttgccaagtatcgagagtctttaaatattccatcttcttctgatcgaaaggtc
ttgatctaa
DBGET
integrated database retrieval system
