Acinetobacter defluvii: DJ533_08185
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Entry
DJ533_08185 CDS
T05474
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
adv
Acinetobacter defluvii
Pathway
adv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DJ533_08185 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adv03019
]
DJ533_08185 (rhlB)
Enzymes [BR:
adv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DJ533_08185 (rhlB)
Messenger RNA biogenesis [BR:
adv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DJ533_08185 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
UvrA_inter
Toprim
Glyoxalase
Motif
Other DBs
NCBI-ProteinID:
AWL28543
UniProt:
A0A2S2FC47
LinkDB
All DBs
Position
1236225..1237376
Genome browser
AA seq
383 aa
AA seq
DB search
MSSGFETLNLHPQLKQAIDALGFKEMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLVS
IINDLLNNPIKEKRFRGEPRALILAPTRELAIQIENDARELVKFSGLNVLTLVGGVDFDK
QKKQLDQNVVDILVATPGRLIDFTEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY
SPRKEQRQTLLFSATFSYDVLNLAQQWLYEPVTVEIEPEKKTNADVEQRVYMVENRDKYK
LLREILADEPIEKVMIFANRRDQVRKLYDHLKRDHYKVVMLSGEIAQDKRLKMLDQFKNG
QHNIMIATDVAGRGIHVDGVSHVINYTLPEQSDDYVHRIGRTGRAGTQGVSISFLSEDDA
FYLPEIEKAIGQKLPLTRLDGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggtttcgaaaccctaaatttacatccgcaactgaagcaagcaattgatgct
ttagggtttaaagaaatgaccccgattcaacaaaaagtattgaaatacacgttggcaggg
catgatgcaattggacgtgcacaaacaggcacaggaaaaactgctgcatttttagtcagt
attattaatgatttgttgaataatcccatcaaggaaaaacgctttcgtggtgaacctcgt
gctttaattttagcaccaacacgtgaacttgcgattcagattgaaaatgatgcccgtgaa
ttggttaaattttcaggtttgaatgttttaactttagtgggtggtgtagattttgataaa
cagaaaaagcaactggatcaaaatgtcgttgatattttagtggcaacacctggtcgcttg
attgattttactgagcaaaaagaagtttggctagatcagattgagtttttagtgattgat
gaagcagaccgtttattggatatgggctttatcccgtcagtaaaacgtattgtgcgctat
tcaccacgtaaagagcaacgtcaaactttattgttctctgcaacttttagctatgatgtg
ttgaacttggctcagcaatggctatatgagccagtaactgttgaaattgagccagaaaag
aaaaccaatgccgatgtagagcaacgtgtttatatggttgaaaatcgcgataaatataaa
ttattacgtgaaatcctagcggatgagccgattgagaaagtgatgatctttgccaatcgc
cgtgatcaggtgcgtaaactatatgaccatttaaaacgtgaccattataaagtagtgatg
ttgtcaggtgaaatcgcacaagacaaacgtttaaaaatgttagatcagtttaaaaatggt
caacacaatattatgattgcaactgatgttgctggtcgtggcattcatgtggacggtgtg
tcgcatgtcattaactataccttacctgaacaatcggatgattatgtgcatcgtatcggt
cgtacagggcgagcaggcactcaaggggtgagtattagtttcttgtcagaagatgatgct
ttttatttacctgaaattgagaaggcaattgggcaaaaactacctttgactcgtttagat
gggtattgctaa
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