Acinetobacter defluvii: DJ533_09180
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Entry
DJ533_09180 CDS
T05474
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
adv
Acinetobacter defluvii
Brite
KEGG Orthology (KO) [BR:
adv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adv03016
]
DJ533_09180
Enzymes [BR:
adv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DJ533_09180
Transfer RNA biogenesis [BR:
adv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DJ533_09180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DUF6148
Motif
Other DBs
NCBI-ProteinID:
AWL30485
UniProt:
A0A2S2FI83
LinkDB
All DBs
Position
1442072..1443208
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AA seq
378 aa
AA seq
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MFQFIHQQNELDHVIHLMRQSSIYGLDTEFIKVDTLWPKLGVFQINVCDQVFLLDGTTLD
LSAFWASIYQAEQNVFHACSEDIDLIYHYSQKSCLENVFDTQVAMSFLGHGLQVSYQSAL
KTVLNIDIDKDQTRSDWLARPLSCKQMNYAANDVLYIMQLATDLKKQLTDKNLYECVVED
CNHLTFEIAQETPKDKLYCDIGNYRHSRKQLMQLQQLSLWREELAKALNQPRSFILKNST
MNDLVEKNPKNNFQLSHAKDIRPHIVREHGKTILDLLKFLPNIEEWPLRIARPIKHSSQE
IAQAMDDLILNTSIEMDIPKEVIMRKKWLSALYQHVVFQGDEQDLPRYLLGWRYDILTQP
LLKILSKDKQYLTTQMEV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaatttattcatcagcaaaacgaacttgatcacgttattcatttaatgcgtcaa
agttcaatttatgggctagatactgagtttattaaagtcgatactttatggccaaaactt
ggtgtgtttcaaattaatgtttgtgatcaagtgtttttacttgatggcacgacattggat
ttgtcagcattttgggcgtccatttatcaagctgaacaaaatgtttttcatgcgtgtagt
gaagatattgatttgatttatcattactcccaaaaaagttgtttagaaaatgtctttgat
acgcaagtggcgatgtcttttttaggacatggtttgcaggttagttatcagtctgctttg
aaaacagttttaaatattgatattgataaagatcaaacgcgctcagattggttggcacgt
ccattaagctgtaaacaaatgaattatgctgcaaatgatgttttatatatcatgcagtta
gccactgatttaaaaaagcaattaactgataaaaatctttatgaatgtgtggttgaagat
tgtaaccatttaacttttgaaattgcacaagaaacgccgaaagacaaactttattgtgat
attggtaattatcgtcattcacgcaaacaattaatgcaattacaacaattaagtttgtgg
cgtgaagagttagcaaaagctttaaatcaaccacgtagttttattttgaaaaactcaacc
atgaatgatttggttgagaaaaatccaaaaaataattttcagttatcacacgctaaagat
attcgtcctcatattgtgcgtgaacacggtaagacgattttagatttattgaagtttttg
ccaaatatagaggagtggcctttacgtattgcacgtcctattaagcattcttcacaagaa
attgcacaggcaatggatgatttgattttaaatacaagcattgaaatggatattcctaaa
gaagtcattatgcgtaaaaagtggttaagtgcgttgtatcagcatgtagtgtttcaaggt
gatgagcaggatttacctcgttatttgctgggttggcgttatgacattctgactcagcca
ttgcttaaaatattgtctaaagataaacaatatttaaccactcaaatggaagtgtag
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