KEGG   Acinetobacter defluvii: DJ533_11590
Entry
DJ533_11590       CDS       T05474                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
adv  Acinetobacter defluvii
Pathway
adv02024  Quorum sensing
adv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DJ533_11590 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DJ533_11590 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adv03019]
    DJ533_11590 (hfq)
   03036 Chromosome and associated proteins [BR:adv03036]
    DJ533_11590 (hfq)
Messenger RNA biogenesis [BR:adv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DJ533_11590 (hfq)
Chromosome and associated proteins [BR:adv03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DJ533_11590 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AWL29161
UniProt: A0A2S2FDV7
LinkDB
Position
complement(1922164..1922685)
AA seq 173 aa
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAPAGAAGQTTGGFGGQGGFGGNQGGFGGNQGGFGGNQGGFGGQGGFGG
QGGFGGNQGGFGGQGGFGGQGGFGGQGGFGGQSSSGFEAETKFEDTQDDENNR
NT seq 522 nt   +upstreamnt  +downstreamnt
atgtctaaaggtcaaactttacaagatccgttcttaaattctctccgtaaagaacgcatt
ccagtttctatctttcttgtaaacggtattaagctacaaggtcatattgaatcgtttgac
caatatgtagtgttattaaaaaacacagtaagccaaatggtttataagcatgcaatttct
actgtagttcctgcacgtaatccacgtccagcaggtgctccagcaggtgcggctggtcaa
actacgggtggctttggcggtcaaggtggctttggtggtaaccaaggtggttttggtggt
aatcaaggcggctttggtggtaatcaaggcggctttggtggtcaaggcggctttggtggt
caaggtggctttggtggtaatcaaggcggctttggtggccaaggtggcttcggtggtcaa
ggtggcttcggtggtcaaggtggcttcggtggtcaatcaagctctggtttcgaagctgaa
actaagtttgaagatacacaagatgatgaaaataatcgttaa

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