Acinetobacter defluvii: DJ533_12985
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Entry
DJ533_12985 CDS
T05474
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
adv
Acinetobacter defluvii
Pathway
adv03030
DNA replication
adv03430
Mismatch repair
adv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DJ533_12985 (dnaQ)
03430 Mismatch repair
DJ533_12985 (dnaQ)
03440 Homologous recombination
DJ533_12985 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adv03032
]
DJ533_12985 (dnaQ)
03400 DNA repair and recombination proteins [BR:
adv03400
]
DJ533_12985 (dnaQ)
Enzymes [BR:
adv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DJ533_12985 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
DJ533_12985 (dnaQ)
DNA replication proteins [BR:
adv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DJ533_12985 (dnaQ)
RNase H
DJ533_12985 (dnaQ)
DNA repair and recombination proteins [BR:
adv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DJ533_12985 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AWL29424
UniProt:
A0A2S2FEQ4
LinkDB
All DBs
Position
2212923..2214392
Genome browser
AA seq
489 aa
AA seq
DB search
MSQTITLYVDGACKGNPGLGGWGAYVITATEEHKLCGGELETTNNRMELSAAIQGIAFCP
KDAKLVLWTDSNYVKRGITEWIENWKKKNWKDVKNPDLWKQLDATCKGRDIEWNWIKGHA
GHAGNEMADQLANLGAANTAKGIQEPQITTIPKTVTQASEIMNEDKKKVETDWLLDDPFG
LDVMENDSSDEFENDMQLENTLGSEIDATSQTASQVIHNDATDENEVSNQISENSVIENA
TSTSHPHIVITPKKLDLQGPRQLILDTETTGFYFQDSDRIIEIGAIEMINRKLTGSSIHI
YINPEKPVGDSEAIHGITDEFLKDKPKYDEIAQVLFDYLKGSEIIAHNASFDMNFLDMEF
KRSGFVALSEVCTVTDTLAMAKSKHPGQKNSLDALVRRYEIPQRDRTFHGALLDAEILSD
VYLAMTGGQVSFDMDALSNANEFSNCSQSRQTIDLDAPIILASDEELTAHQTWMDEFEKK
NGEACIFAK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacgatcacactttatgtagatggtgcatgcaaaggcaaccccgggctcggt
ggttggggagcatatgtgattacagcaacagaggaacacaaactctgtggcggtgagctt
gaaacaaccaataatcgtatggaactttcggctgcgattcaaggcattgcattttgccct
aaagatgcaaaactcgtgctttggacagactctaactatgtcaaacgtggcatcactgaa
tggatcgagaattggaaaaagaaaaactggaaagatgtaaaaaatccagacctctggaaa
caactcgatgcaacctgcaaaggtcgtgatattgaatggaattggatcaaaggtcacgct
ggacatgcaggcaatgaaatggcagatcaactcgccaacttaggtgcagcaaataccgct
aaaggcatccaagaaccacaaattaccacgattcccaaaacagtaacgcaggcgagtgag
atcatgaacgaagataaaaaaaaagttgaaactgattggcttttagatgatccctttggt
ttggatgtaatggaaaatgatagctctgatgagtttgaaaatgatatgcaactcgaaaat
actttgggtagtgaaattgatgcaaccagtcaaactgctagccaagttattcataatgat
gcaacagatgaaaatgaagtgtcgaatcaaatcagtgaaaatagtgtaattgaaaatgct
acttcaacatcccatccgcatattgtaatcaccccaaaaaagcttgatcttcagggtcca
agacaactcattttagatacagaaaccacaggtttttatttccaagacagtgatcgtatt
attgagatcggtgccattgagatgatcaatcgcaaactaacaggcagttcgattcacatt
tatattaaccctgaaaaacctgttggcgactctgaagccattcacggcatcactgatgaa
tttctaaaagataaacctaaatacgatgagattgcccaagtgctctttgactatttaaaa
ggcagtgaaatcattgcgcataatgctagcttcgatatgaacttcttggatatggagttc
aaacgcagtggttttgtggcgttatctgaggtgtgtactgttaccgacaccttagcgatg
gcaaaaagtaaacatccaggacagaaaaattcattagatgcgttagtgcgtcgttatgaa
attccacagcgtgatcgtactttccacggcgccttgctcgatgcggaaatcttatccgat
gtttatcttgcgatgaccggtggacaagtttcttttgatatggatgccttatcgaacgca
aacgagttttcgaattgctctcaaagccgtcaaacaattgatcttgatgcacctatcatt
ttagcttctgatgaagaacttacagcacatcaaacatggatggatgagtttgaaaagaaa
aatggagaagcttgcatctttgcaaaatag
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