Acinetobacter defluvii: DJ533_13825
Help
Entry
DJ533_13825 CDS
T05474
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
adv
Acinetobacter defluvii
Pathway
adv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
adv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DJ533_13825 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adv03021
]
DJ533_13825 (rpoD)
Transcription machinery [BR:
adv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DJ533_13825 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AWL29575
UniProt:
A0A2S2FFK0
LinkDB
All DBs
Position
2381698..2383587
Genome browser
AA seq
629 aa
AA seq
DB search
MSDMHSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APESDDAMFEGNSEATDEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLHSIAYWPNAVEVVLQEYKDYEAGERRLADILSGYLDPETDEVIPE
VLEEEAEEIDEEEEASKKPTKDVKLDDDDEEEEAESEDESEGESGPDPEIAKARFDELEA
AWHTAKESIAKSGRNSPESKEAMEALASVFMMFKFTPRLFDIISEMIRGTHEQIRTSERE
VMRYAVRRGRMDRTQFRTSFPGQESNPAWLDEQIAKAPAELKGYLEKVRPDVLAFQQKIA
DIEKELDLDVKGIKDISKRMAIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLI
QEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINR
VSRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIED
GNITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRE
RIRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgcattcccctacttcacaagtagcggctctgattagccgaggcaaagaa
caaggttacttaacctatgctgaggttaacgatcatctcccagactcaatcacagaaagt
gaacagattgaagacattattcaaatgcttcaagacgtagggattcctgtgcatgaacgt
gcacctgaatctgacgatgcgatgttcgaaggcaacagtgaagcaacagatgaagttgct
gaggaagaagctgctgcagttcttgcttctgtagaaaatgaacctggtcgtacaactgac
cctgtgcgtatgtatatgcgtgaaatgggaacggttgaacttttaactcgtgaaggcgag
attagcattgcaaaacggatcgaagaaggcatccgtgatgttttacattccattgcatat
tggccaaatgcggtagaagtggttctacaagaatataaagattatgaggcgggtgaacgc
cgtttagcagacattttatcaggttatttagaccctgaaacagatgaagtaattcctgaa
gttttagaagaagaagctgaggaaattgatgaggaagaagaggcatcaaaaaaaccaacc
aaagatgtgaagttggatgatgatgacgaagaagaagaagctgaaagcgaagatgaatct
gaaggcgaatctggacctgaccctgaaattgctaaagcacgtttcgatgagttagaagcg
gcttggcatactgccaaagaatctattgcaaaatcaggtcgtaatagccctgaaagtaaa
gaagcaatggaggcacttgcaagcgtatttatgatgtttaaatttacaccacgtttattt
gatatcatttcagaaatgattcgtggcacacatgagcaaatccgtacctctgaacgtgaa
gtgatgcgttatgcagtgcgtcgtggtcgcatggatcgtacgcaattccgcacatcattc
cctggtcaagaatcaaaccctgcatggttagatgaacaaattgctaaagcacctgctgaa
ctcaaaggctacttagagaaagttcgtcctgacgtgttagctttccaacaaaaaattgct
gatattgaaaaagaacttgatctagatgttaaaggcattaaagatatttccaaacgtatg
gcgattggtgaagccaaagctcgccgtgcgaaaaaagaaatggttgaagctaacttacgt
ttggtgatttcgattgccaaaaaatataccaaccgtggcttacaattccttgatttaatt
caagaaggtaacatcggtttgatgaaagcagtagacaagtttgaatatcgtcgtggttat
aaattctcgacgtatgcaacttggtggattcgtcaggcgatcacacgttcgattgcagac
caagcacgtactattcgtattccagtgcatatgattgaaacaattaacaagatcaaccgt
gtatctcgtcaattgttacaagaaatggggcgtgaacctacacctgaggaattaggtgaa
cgtttagaaatggacgaagtcaaagttcgtaaagtacttaagatcgccaaagagccaatt
tcgatggaaacaccaattggtgatgatgaagattcgcatcttggggacttcattgaagat
ggtaacatcacttctccagtcgatgctgcaacctctgaaggcttaaaagaagcaacccgt
gaagttttagagaacttaactgaacgtgaagccaaagtattaaaaatgcgttttggtatc
gatatgccaaccgaccatactttggaagaagtcggtaaacaatttgatgtaacacgtgaa
cgtattcgtcagattgaagcgaaagctttacgtaaattacgtcacccttcacgttctgag
catttacgttcgttcttggaaaatgactaa
DBGET
integrated database retrieval system
