Acinetobacter defluvii: DJ533_15425
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Entry
DJ533_15425 CDS
T05474
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
adv
Acinetobacter defluvii
Brite
KEGG Orthology (KO) [BR:
adv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adv03016
]
DJ533_15425
Enzymes [BR:
adv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
DJ533_15425
Transfer RNA biogenesis [BR:
adv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
DJ533_15425
Prokaryotic type
tRNA splicing ligases
DJ533_15425
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AWL29857
UniProt:
A0A2S2FFU6
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All DBs
Position
2708813..2710018
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AA seq
401 aa
AA seq
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MGIQKILNAKAEYGVPVKIYTNDVDEESMTQLRKMAQLQFIHSHIAVMPDVHLGKGATVG
SVIPTKNAIIPAAVGVDIGCGMNAMRLSLKAEQLPDNLSALRNAIERKVPVGFEMHKQIK
AKASTLAPLDKRLKLITDKHPALKRMLRHFDSTWQKQIGTLGGGNHFIELCLDENDDVWV
MLHSGSRGLGNVIGTYFIERAKKEAQNRFGHVPDKDLSYFAEGSNSFEDYFEAVEWAQEY
AYENRREMMRLILEAIRPLLPSFQMTKEAINCHHNYVQKELHFGEEVFVTRKGAIRAGTD
EYGIIPGSMGAKSFIVKGKGNPDSFCSCSHGAGRRMSRSKAKNLFSQQDLIAQTQGIECR
KDKGVVDEIPSAYKDIDEVMANQTDLIEVVHTLKQVMCVKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaattttgaacgccaaagcagagtatggcgttcctgtaaaaatctac
accaatgatgtcgatgaagaaagcatgacacaattgcgaaaaatggcgcaattacagttt
attcactcccatattgcagtgatgccagatgtgcatttaggtaaaggtgcaacagtaggc
agtgtcattccgactaaaaatgctattattcctgcggcagtcggtgtagatattggttgt
ggcatgaacgcaatgcgattaagtttaaaagcagagcaattacctgataatttaagtgca
ttacgtaacgcgattgaacgaaaagtcccagtcggttttgaaatgcataagcaaatcaaa
gctaaagcttcgactctcgcaccattggacaaacgcttaaaactgatcaccgataagcat
cctgcactgaaacgcatgttacgtcattttgattcaacatggcaaaaacaaattggcacg
ttgggtggtgggaatcattttatcgaactttgtttagatgaaaatgatgatgtttgggtc
atgttgcattctgggagtcgagggctaggaaatgtgattggcacctactttatcgaacgt
gccaaaaaagaagcgcaaaatcgattcgggcatgtacctgataaagatttgtcatacttt
gctgaaggttcaaacagttttgaggattattttgaagctgtagaatgggcacaagaatat
gcttatgagaatcgccgtgaaatgatgcgccttattttagaagcaattcgtccactttta
ccaagctttcaaatgaccaaagaagccatcaattgtcatcataattatgtgcagaaagaa
ctacattttggtgaagaagtctttgtgacacgtaaaggtgcaattcgtgcaggtactgat
gaatacggtattattccaggttcaatgggtgcgaaatcattcattgtcaaaggtaaaggc
aacccagattcattttgctcatgttcgcatggcgcaggtcgtcgtatgagccgcagtaaa
gccaaaaatctgtttagtcagcaagacttaattgcgcaaacacaaggaatcgaatgccgt
aaagataaaggtgtagtggatgaaattccgagtgcctataaagatatcgatgaagtaatg
gctaatcaaactgacttaattgaggtcgttcacaccctcaaacaagtcatgtgcgttaaa
ggttaa
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