Achromobacter deleyi: HLG70_11365
Help
Entry
HLG70_11365 CDS
T07788
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ady
Achromobacter deleyi
Pathway
ady02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ady00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HLG70_11365 (pdeR)
Enzymes [BR:
ady01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
HLG70_11365 (pdeR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
GGDEF_2
CRISPR_Cas2
PAS_10
Nre_C
Motif
Other DBs
NCBI-ProteinID:
QVQ28954
LinkDB
All DBs
Position
complement(2541174..2543171)
Genome browser
AA seq
665 aa
AA seq
DB search
MTENQDEKAILHTHFGTHSPYWRLSADSDAIELAAVKGATNIAMALRPDQADTIRGLTGI
TSSVRIDISLYGDLLRLHLVGRKINPNEWAGTASAHTDTESVAKDLVEGLSFAETVVSEA
NSVIVIVDQNGRVQRFNKLSEEYTGKREQDIVGRSVFEMFMTREEAIASRRNIAEFYKRG
QSYEVERLINTVKGPRLFLFRNKFVTSGSGEKRVYLICSGTDITEERQAQERLRVLANTD
MLTNLPNRHAITSRLKAALAAGREGRGGVLFLDLDNFKRINDHYGHGFGDRLLKAVAVAI
STCLSEGQTLARLGGDEFIVLQEEAQAWQLEATAERIIERLREPFRQGLIEVYTSCSIGI
AMYPDHGADLDSVVRSADIAMYVAKEAGRHTYRVFQHEMDRRNADYVWLDTNLRKALAEN
HLMLYYQPKLAGRTGEVDGVEALVRWRSPERGMVGPNVFIPYAEESGLISPLGVWVMREA
ARQAAAWKRDGLNIRIAINMSARQLDDKGVVSEFMRAINDASLDPCLLDIELTESCLIDD
EDAAIELIKQFRQLGARVHLDDFGTGYSSLSQLARIPLDTIKLDASFVRGVNENPVSQAL
ARAIVAVARTLELKVIAEGVETPEEAAFLDTLGVDAKQGFLYAKPMPAEEFAAWLAQRRR
LHLIA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaccaggacgaaaaagcgatcctgcacacgcatttcggtacgcatagccca
tattggcgattgtccgccgatagcgatgccattgaactggccgcggtcaagggcgcgacc
aatatcgcgatggctttgcgcccggaccaggcggacaccatccgcgggctgaccggcatc
acgtccagcgtgcggatcgatatttcgctgtatggcgacttgctccgcctgcatctggtg
ggccgcaagatcaatcccaatgaatgggccggcaccgcgtctgcccataccgataccgaa
tccgtcgccaaggatctggtcgaaggcctgtcgttcgccgagaccgtggtgtcggaggcc
aactcggtcattgtcatcgtcgaccagaacggccgggtgcagcgcttcaacaagctcagc
gaggaatacaccggcaagcgcgaacaggacatcgtgggccgcagcgtcttcgagatgttc
atgacgcgggaggaggccatcgcctcccggcgcaatatcgccgagttctacaagcgcggg
cagtcctatgaagtcgagcgcctgatcaatacggtcaagggcccccggctgttcctgttc
cgcaacaagttcgtcaccagcggcagcggcgagaagcgcgtctacctgatctgctcgggc
accgacatcaccgaagagcgccaggcgcaggaacgcctgcgggtgctggccaataccgac
atgctgaccaacctgccgaaccgccacgcgatcacctcgcggctgaaggcggcgctggcg
gcggggcgggaagggcgcggcggcgtgctgttcctggacctggacaacttcaagcgcatc
aacgatcactacggccacggctttggcgaccgcctgctcaaggcggtggcggtcgccatt
tccacctgcctgtccgagggccagaccctggcccgcctgggcggcgacgagttcatcgtc
ctgcaggaggaagcgcaggcctggcagctggaagccaccgcggaacgcatcatcgaacgg
ctgcgcgagcccttccgccaaggcctgatcgaggtctacaccagctgctccatcggcatc
gccatgtacccagaccatggcgcggacctggacagcgtggtgcgcagcgccgacatcgcg
atgtatgtggccaaggaagcaggacggcacacctaccgcgtgttccagcacgagatggac
cgccgcaatgcggattacgtctggctggacaccaacctgcgcaaggccctggccgaaaac
cacctgatgctgtactaccagcccaagcttgccggccgcaccggcgaggtcgacggggtg
gaagccctggtgcgctggcgttctccggaacgcggcatggtcgggcccaacgtcttcatt
ccctacgccgaagaatcgggcctgatttcgccgctgggcgtctgggtcatgcgcgaagcc
gccaggcaggcggcggcctggaagcgcgacggcctgaacatccgcatcgcgatcaacatg
tcggcccgccagctggacgacaagggcgtggtcagcgaattcatgcgggccatcaacgat
gccagcctcgatccctgcctgctggacatagaactgaccgagagctgcctgatcgacgac
gaagacgccgccatcgaactgatcaagcagttccgccagcttggcgcgcgcgtccacctc
gatgacttcgggacgggctactcctcgctgtcgcagctggcgcgcattccgctggacacg
atcaagctggacgccagtttcgtgcgcggcgtgaacgaaaatccggtgtcgcaggcgctt
gcgcgcgccatcgtcgccgtggcgcgcacgctggaactcaaggtgatcgccgaaggggtg
gaaacgccggaagaggcggcgttcctggacaccctgggcgtggacgccaagcaaggcttt
ctctacgccaagcccatgcccgccgaggagttcgccgcctggctggcgcaacgccgccgg
ctgcatctgattgcctga
DBGET
integrated database retrieval system
