Achromobacter deleyi: HLG70_14360
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Entry
HLG70_14360 CDS
T07788
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ady
Achromobacter deleyi
Pathway
ady00541
Biosynthesis of various nucleotide sugars
ady01100
Metabolic pathways
ady01250
Biosynthesis of nucleotide sugars
Module
ady_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ady00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HLG70_14360 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ady01005
]
HLG70_14360 (rfaD)
Enzymes [BR:
ady01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HLG70_14360 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ady01005
]
Core region
HLG70_14360 (rfaD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QVQ29505
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All DBs
Position
complement(3191084..3192073)
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AA seq
329 aa
AA seq
DB search
MIVVTGAAGFIGSNLVRGLNRRGIEDIIAVDDLTEGDKFVNLVDCRIADYMDKDDFRRRV
ADGSLPEVRAVLHQGACSDTTERNGRYMLDNNYRVTLELFEFCQARRIPFLYASSAAVYG
GSSVYVEHPDNEGPLNVYGYSKLLFDQVLRKRLDSLTAQVVGLRYFNVYGQHEQHKGRMA
SVAFHNMNQFLEHGHVRLFAGWDGYVDGGQSRDFISVEDVVAVNLHFLDHPEQSGIFNCG
TGRAQPFNDVAAAVVNTLRAERGEAELTLAQLAELDLIRYIPFPDDLKGRYQSYTQADVT
QLRGAGFTAPMRDVQTGVAEYVRYWRARR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgttaccggagccgcgggcttcataggcagcaacctggtgcgtgggcttaac
cgccgcggcatcgaggacatcatcgcggtcgatgatctgaccgagggcgacaagttcgtc
aatctcgtcgattgcaggatcgccgattacatggacaaggacgacttccgccggcgcgtg
gccgacggcagcctgcccgaagtgcgggccgtattgcaccaaggcgcctgctcggacacg
accgagcgcaacggccgctacatgctcgacaacaactaccgcgtcacgctggagctgttc
gagttctgccaggcgcgccgcattccgttcctctacgcctcgtccgccgcggtgtatggt
ggctcttcggtctacgtcgagcaccccgacaacgaaggcccgctgaacgtctacggctat
tccaagctcctgttcgaccaggtgctgcgcaagcgcctggacagcctgacggcgcaagtg
gtgggcctgcgttacttcaatgtctacggccagcacgaacagcacaagggccgcatggcc
tcggtggcgttccacaacatgaaccagttcctggaacatggccacgtgcgcctgttcgcg
ggctgggacggctatgtggacggcggccagagccgcgacttcatttcggtcgaggacgtg
gtcgcggtcaacctgcacttcctggatcaccccgagcaatccggcatattcaactgcggc
accggccgggcgcagccgttcaatgatgtggcggccgccgtggtgaacaccttgcgcgcc
gaacgcggcgaggccgagctgacgctggcgcaactggcggagctggacctgatccgctat
atccccttcccggacgatctcaagggccgctaccagagctatacgcaggcggacgtcacc
cagctgcgcggcgcagggttcaccgcgccgatgcgcgatgtgcagaccggcgtggcggag
tacgtgcgctattggcgcgcccgcaggtag
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