Achromobacter deleyi: HLG70_16315
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Entry
HLG70_16315 CDS
T07788
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ady
Achromobacter deleyi
Pathway
ady03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ady00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLG70_16315 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ady03019
]
HLG70_16315 (pnp)
03016 Transfer RNA biogenesis [BR:
ady03016
]
HLG70_16315 (pnp)
Enzymes [BR:
ady01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HLG70_16315 (pnp)
Messenger RNA biogenesis [BR:
ady03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HLG70_16315 (pnp)
Transfer RNA biogenesis [BR:
ady03016
]
Prokaryotic type
tRNA degradation factors
HLG70_16315 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
OB_PDCD11
OB_RRP5_4th
KH_KhpA-B
KH_SLS1_2
S1_TP0910
KH_NusA_2nd
DUF5813
Motif
Other DBs
NCBI-ProteinID:
QVQ24465
LinkDB
All DBs
Position
complement(3642880..3645039)
Genome browser
AA seq
719 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVASKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGQYVLNPTATQLKSSKLDLVVA
GTENAVLMVESEAQQLSEEVMLGGVVYGHEQMQAVINTIHDLVKDAGKPDWDWQAPAKDE
ALIAAVTAAAQEGLNAAYQIREKQARTAKLREVSADVSAKLAAAAAEKGESLPDAVTVDN
IMFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMMHYNMPPFATGETGRIGVPKRREIGHGRLAKRSLIPLL
PAPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMKDALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQIYEGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEQQTGAAAEAAPQSEPQAE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtgactaaatcgttccagtacggccagcacacggtcgtcctggaaact
ggcgaaatcgctcgccaggcctccggcgccgttgtggtgtcgatcgaggacaccgttgtc
ctggccactgtcgtggcttccaagaaggccaagccgggtcagacgtttttcccgctgacc
gtcgactacatcgagaagacctacgctgccggccgtatcccgggcgggttcttcaagcgc
gaaggcaagccctccgaaaaggaaacgctgacctcgcgcctgatcgaccgtccgctgcgt
ccgctgttccccgaagacttctacaacgaagtccaggtggtcatccacacgctgtcggtc
aatcccgagattgatcccgacatcgccgccatgatcggcgcgtccgccgcgctggccatc
tcgggcatcccgttcaacggccccatcggcgccgcgcgcgtgggttacatcgacggccag
tacgtcctcaacccgaccgccacgcagctgaagtcctcgaagctggacctggttgtcgcc
ggcaccgaaaacgccgtgctgatggtggaatcggaagcccaacagctgtccgaagaagtc
atgctgggcggcgtggtctatggccacgagcagatgcaggccgtcatcaacaccattcac
gacctggtgaaggacgccggcaagcccgattgggactggcaagctcccgccaaggacgaa
gccctgatcgccgcggtgaccgccgctgcccaggaaggcctgaacgccgcctaccagatc
cgcgaaaagcaggcccgtacggccaagctgcgtgaagtgtcggccgacgtgtcggccaag
ctggctgccgccgccgctgaaaagggcgagtcgctgccggacgccgtgactgtcgacaac
atcatgttctcgctggaatcggccattgtccgcggccagatccttaacggcgaaccgcgt
atcgacggccgcgacacccgcaccgtgcgccccatcagcgtgcgtctgggcgtgctgccc
cgcgcacacggcagcgcgctgttcacccgtggtgaaacccaggcgctggtcgtggccacg
ctgggcaccaagcaggacgagcagatcatcgacgcgctcatgggcgagtaccgtgaccgc
ttcatgatgcactacaacatgcctccgttcgccaccggcgaaacgggccgcatcggtgtg
cccaagcgccgcgaaatcggccacggccgcctcgccaagcgttcgctgatcccgctgctg
ccggctcccgaagacttccagtacacgatccgcatcgtgtcggaaatcactgaatccaac
ggctcctcgtcgatggcttcggtctgcggcggttcgctggccatgatggacgccggcgtg
ccggtcaaggatcacgtggccggcgtggccatgggcctgatcctggacggcggcaagttc
gccgtgctgacggacattctgggcgacgaagatcacctgggcgacatggacttcaaggtt
gcgggcaccgaaaacggcgtcaccgcactgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaagtggcgctggctcaggcccgcgaaggccgcctgcacatcctgggc
aagatgaaggatgcgctggacggttcgcgcggcgagctgtcggctttcgccccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaagaaaccggcacgcagatcgacatctccgacgacggcacgatc
gtgatcgccagcgtcgacgaagcgcaggcgaaggaagcccagcgtcgtatcgtcgaactg
accgccgacgtcgaagtgggccagatctacgaaggctcggtcctgcgtctgctggacttc
ggcgccatcgtgcaagtgctgccgggccgcgacggcctgctgcacatctcggaaatcgcc
aactaccgcatcgcgaacatcaacgatgttctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtccatcaaggctatcggtggtatc
gagcagcaaaccggcgccgctgccgaagcagccccccaatcggaaccgcaagctgagtaa
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