Achromobacter deleyi: HLG70_17335
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Entry
HLG70_17335 CDS
T07788
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ady
Achromobacter deleyi
Pathway
ady03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ady00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLG70_17335 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ady03019
]
HLG70_17335 (pcnB)
Enzymes [BR:
ady01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HLG70_17335 (pcnB)
Messenger RNA biogenesis [BR:
ady03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HLG70_17335 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QVQ24652
LinkDB
All DBs
Position
3864297..3865664
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AA seq
455 aa
AA seq
DB search
MITETIRKFVGRLFAPAPRGPLRIARDKHGIDRRNVSRHAIKVCEVLRQHGYEAYIVGGA
VRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPAS
EDQETDEHGRILRDNVFGSQEEDAKRRDFTMNALYYDPHNEEVIDYHDGVADLKKRQIRI
IGDPVKRYREDPVRMLRAVRFAAKLNGTIDPATRQPISTMAELIENVPASRLFDEMLKLL
TCGHAMDCLRQLRADGLHNGLLPLLDVVLEQPGGEHFVELALERTDARVRAGKTISPSFL
FAALLWQQVDMRWKQLRAQGEHTIPALSAAADSVLEEQTEKLAIQRRFSSDMREIWFMQP
RFERRMGKTIFRMIEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANADDATRADMIEE
VARLPREAGDAPSAPAARKRRRPRRSAPRSAPGTE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgaaaccataagaaaattcgtcggccgactgttcgcgccggcaccccggggg
ccgttgcgcatcgcgcgcgacaagcacggcatcgaccgtcgcaacgtttcgcggcacgcc
atcaaggtgtgcgaagtcctgcgccagcatggctacgaagcctatatcgtcggcggcgcg
gtgcgcgacctgatcgtggggctcgaacccaaggacttcgacgtggccaccaacgccacg
cccgaacagatccgcccgctgtttcgccgcgcccgcatcatcggccgccgcttccagctg
gtccacgtcgtgttcggccaggaaatcatcgagacctccaccttccgcgctccggcctcg
gaagaccaggaaaccgacgagcacggccgcatcctgcgcgacaacgtgttcggttcgcag
gaagaagacgccaaacgccgcgacttcaccatgaacgcgctgtactacgatccccacaac
gaggaagtcattgactaccacgatggcgtggcggacctgaagaagcgccagatccgcatc
atcggcgacccggtcaagcgctaccgcgaagacccggtccgcatgctgcgcgcggtgcgt
ttcgccgccaagctcaacggcacgatcgacccggccacccgccagcctatcagcaccatg
gcggagctgatcgagaacgtcccggcctcgcgcctgttcgacgaaatgctcaagctgctg
acctgcggccatgccatggactgcctgcgccagttgcgcgccgacggcctgcacaacggc
ctgctgccgctgctggacgtggtgctggagcagcccggcggcgaacacttcgtggaactc
gcgctggaacgcaccgacgcgcgcgtgcgcgccggcaagaccatcagccccagtttcctg
ttcgccgcgctgctgtggcagcaggtggacatgcgctggaagcagctgcgcgcccaaggc
gagcacaccatcccggcgctgtcggcggccgcggactcggtgctcgaggagcagaccgag
aagctcgccatccagcgccgcttctcgtccgacatgcgcgagatctggttcatgcagccg
cgtttcgagcggcgcatgggcaagaccatcttccgcatgatcgaacagccgcgcttccgc
gccgcctgcgacttcctgcagctgcgcgccgcggccggcgagttcgacagcgtgctggcg
cagtggtggatggacctggccaatgccgacgacgccacccgcgccgacatgatcgaggaa
gtcgcgcgcctgccgcgcgaagccggcgacgccccgtccgcccccgccgcgcgcaagcgc
cgccgcccgcgccgcagcgcgccgcgcagcgcccccggcaccgagtaa
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