Achromobacter deleyi: HLG70_18995
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Entry
HLG70_18995 CDS
T07788
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ady
Achromobacter deleyi
Brite
KEGG Orthology (KO) [BR:
ady00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ady03016
]
HLG70_18995
Enzymes [BR:
ady01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HLG70_18995
Transfer RNA biogenesis [BR:
ady03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HLG70_18995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QVQ24949
LinkDB
All DBs
Position
4217492..4219405
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AA seq
637 aa
AA seq
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MYVFYEDDGSFKAGNILSETDASLQVESDSGKRSKIKRANTLFNFAAPEPAALMSQAAAT
AESLDLQFLWECAPQEEFDSPALAADYFGHAPTAVEQAALLMRLHGAPAYFHRRGKGRYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQAAESLLIRPDKNSQQWKA
LDAACARLGKSPDRLLLELGAWPHALALHKRRFLAVNFPRGLAFPELELPPVDRELPLSD
AEVYSVDDVTTTEIDDALSVTTLPDGRLRVGIHVAAPGLTVTRDSEFDKLARARLSTVYM
PGDKIPMQPDSVITAFSLDAGREVPVLSLYVVADPETGEVIESETRLERIVVRENLRHNM
LDAHVTEASLADPSAELPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLNQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLIAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQNGVTRTVAHVLRDDLVRFGNAPLVTRVGGMPELER
GTAVEIDILGMDELSLELDCRYVGQVKVEAAEDAAAT
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggcaatatcctgtccgagacc
gacgccagccttcaggtggagtccgactcgggcaagcgcagcaagatcaagcgcgccaat
accctgttcaacttcgccgcgcccgaaccggcggcgctgatgagccaggcggccgccacc
gccgaatcgctggacctgcaattcctgtgggagtgcgcgcctcaggaagaattcgactcg
cccgccctggccgccgactacttcggtcacgcccccacggccgtcgagcaggctgcgctg
ctgatgcgcctgcatggcgcgccggcgtacttccaccgccgcggcaagggccgctaccgc
cccgccccgcccgacatcctggccgccgcgctggccgcgctggaaaagaagcagcgccag
gccgagcagcagcaggaatgggtcgacgagatggccgccggacgcctgcccgagcctatc
gcgcaggccgccgagtcgctcctgatccgtccggacaagaattcgcagcaatggaaggcg
ctggacgccgcctgcgccaggctgggcaagagcccggaccgcctgctgctcgagctgggc
gcctggccgcatgcgctggcgctgcacaagcgccgcttcctggcggtgaacttcccgcgc
gggctggccttccccgagctggaactgccgcccgtcgaccgcgaactgccgctgtcggac
gccgaggtctactcggtggatgacgtcacgaccaccgaaatcgacgacgcgctgtccgtc
accaccctgcccgacggccgcctgcgcgtcggcatccacgtggcggcgcccggcctgacc
gtcacccgcgacagcgaattcgacaagctggcccgcgcccgcctgtccacggtctacatg
ccgggcgacaagatcccgatgcagccggacagcgtcatcacggcgttttcgctggacgcg
ggccgtgaagtgcccgtgctgtcgctgtatgtggtggccgacccggagaccggcgaggtc
atcgaatcggaaacgcggctggaacgcatcgtcgtgcgcgagaacctgcgccacaacatg
ctggacgcccatgtcaccgaagccagcctggccgacccgtcggccgaactgccctacggc
cactggctgcgcccgctgtggaagctggcgcaggcgctgtcggcgcagcgcgagaacgtg
cgcggcaagccggaaaacaactcgcgggtggagtacagcttctacctggacggcaacccc
gacgaccccgacacccccgtgcgcctggtcccgcgccagcgcaatgcgccgctggaccgg
atggtggccgaatacatgatcctggccaacaacctgtggggcggcttgctgaaccagcat
ggcgtgccgggtatctaccggtcgcaacaggctggccgcgtgcgcatgagcacgcaggcg
ctgccgcacgaggccatcggcgttccgcagtacgcctggagcacgtcgccgctgcgccgc
tatgtcgacctggtcaatcagtggcaactgattgccgcggtcgagcacggcgtgtctgcg
cgcctgatcgcccccttcaagccgcgcgatgcggacctgttcgccatcatcggcgctttt
gacgcgcagtacgcggcctgggccgagttccagagcgcgatggagcgctactggtgcctg
cgctggctcaagcagaacggcgtgacccgcacggtcgcccacgtcctgcgcgacgacctg
gtccggttcggaaatgcgccgctggtgacgcgggttggcgggatgccggaactggagcgg
ggcacggcggtcgagatcgatattctcgggatggatgagctgtcgttggagctggactgc
cggtatgtggggcaggtgaaggtcgaggctgccgaggacgcggcggctacttga
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