Achromobacter deleyi: HLG70_22740
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Entry
HLG70_22740 CDS
T07788
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ady
Achromobacter deleyi
Pathway
ady00300
Lysine biosynthesis
ady00470
D-Amino acid metabolism
ady01100
Metabolic pathways
ady01110
Biosynthesis of secondary metabolites
ady01120
Microbial metabolism in diverse environments
ady01230
Biosynthesis of amino acids
Module
ady_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ady00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HLG70_22740 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HLG70_22740 (dapF)
Enzymes [BR:
ady01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HLG70_22740 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PmbA_TldD_2nd
CPT
Motif
Other DBs
NCBI-ProteinID:
QVQ25655
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Position
complement(5023611..5024522)
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AA seq
303 aa
AA seq
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MGDNPVMNWNFTKMHGAGNDFVVLDGVRQAIEMTPERARALGDRHFGIGADQILLVERAT
RPDADFRYRIFNSDGTEVEHCGNGARCFVRFVHEQGLSDRNPLRAEIATGILVLDEGDDE
QVTVEMGSTRFDPAALPFDTAGLASRTQGHDTLWDLELDAPAGLPRTVAVSAVAISNPHA
VQVVDDVDTAPVSVLGPLIETHPRFARRVNAGFMQVVDRHNIRLRVFERGAGETLACGTG
ACAAVAAGIRRGLLESPVRVQTRGGVLTIDWNGEQLRMTGPAESVFTGQVDIDKLVFSMA
LNR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataatcccgtgatgaactggaacttcaccaaaatgcatggcgcgggcaatgat
ttcgtcgtgctcgacggcgtccgtcaggccatcgaaatgacgcccgagcgcgcccgcgcc
ttgggcgaccggcacttcggcatcggcgccgaccagatcctcctggtcgagcgcgccacg
cggccggacgccgatttccgctatcgcattttcaactccgacggcaccgaggtcgaacac
tgcggcaacggcgcccggtgcttcgtgcgcttcgttcatgaacagggcctgtcggaccgc
aacccgctgcgcgcagagatcgccaccggcatcctggtgctggacgagggcgacgacgaa
caggtcaccgtggaaatgggcagcacccgtttcgacccggccgccctgccgttcgacacc
gccggcctggcctcgcgcacgcaaggccatgacacgctgtgggacctggagctggatgcg
cccgccggcctgccgcgcacggtcgccgtgtccgcggtggccatctccaatccgcatgcg
gtgcaggtggtcgacgacgtcgacaccgcgccggtgtccgtcctcggccccctgatcgag
acccatccgcgctttgcgcgccgggtcaacgccggcttcatgcaagtcgtggaccgccac
aacatccgcctgcgcgtcttcgagcgcggcgccggcgaaaccctcgcctgcggcacgggc
gcctgcgccgccgtcgcggccggcatccgccgcggcctgctcgaatcccccgtgcgcgtg
cagacgcgcggcggcgtgctcaccatcgactggaacggcgagcaactgcgcatgaccggt
cccgccgaatccgtcttcacgggccaggtcgacatcgacaagctcgtcttctccatggcg
ctgaaccgataa
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