Arcobacter defluvii: ADFLV_0003
Help
Entry
ADFLV_0003 CDS
T06891
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
adz
Arcobacter defluvii
Brite
KEGG Orthology (KO) [BR:
adz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adz03032
]
ADFLV_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:
adz03400
]
ADFLV_0003 (gyrB)
Enzymes [BR:
adz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ADFLV_0003 (gyrB)
DNA replication proteins [BR:
adz03032
]
Prokaryotic type
DNA Topoisomerases
ADFLV_0003 (gyrB)
DNA repair and recombination proteins [BR:
adz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ADFLV_0003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QKF76076
UniProt:
A0AAE7BB34
LinkDB
All DBs
Position
2585..4906
Genome browser
AA seq
773 aa
AA seq
DB search
MSQQEYGANNIKVLKGLEAVRKRPGMYIGDTNTNGLHHLVYEVVDNSIDEAMAGYCKNIK
ITMTKDHWIKVEDDGRGIPTAIHQGEGISAATVVLTVLHAGGKFDKDTYKVSGGLHGVGV
SVVNALSKHLKMTIYREGKIHYQEFKCGIPQGSLEVIGDSPRKTGTTIEFLADDSIFEVT
KYEFAVLAKRFREVAYLNSFISITLDNEITKTKEVYHFEGGIKQFVEDLNKDTAICDSVA
FNDNIDGVEVDIAVMYNETYVEKTLSFVNNIRTIDGGTHEAGFKAGLTRSIVKYLNENAA
AREKDTKITGDDVREGLIAVVSVKVPEPQFEGQTKSKLGSSYVKAITQKLTGDALDKYFE
ENPTQAKAIMEKALMAARGREAAKKARDLTRKKDAMTVGTLPGKLAECQSKDPAIRELYL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIRNMITALGCGIGEDF
DDEKIRYHKIIIMTDADVDGSHIQTLLLTFFFRFLRPVVEKGYLYIAQPPLYRYKKGKNE
IYLKDDTALSAFLIENGLESFTFEGLGYNDLLDLFKIVARYRSMLGQLGKRYSLLEVLKY
LIENNELVNLDFSSLYEKVKEFLDAKGYNILSKTVLDDKIQLFVQTNEGLEELIIDEELF
ASPYFSEATYIYNKLIERDLTVFEGRDLLEILDDIETLAKKGAYIQRYKGLGEMNPEQLW
ETTMIPDNRRLLRVKIEDAEIASDTFTLFMGDEVEPRRNYIEEHAKDVEHLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaagaatacggtgctaataacattaaagttttaaaaggtcttgaagctgtt
agaaaaagaccaggaatgtatattggtgatactaatacaaatggtcttcatcatttagta
tatgaagtagttgataactctattgatgaagcaatggctggttattgtaaaaatataaaa
attactatgacaaaagatcattggattaaagttgaagatgatggaagaggaattcctaca
gctatacaccaaggtgaaggtataagtgctgcaactgttgtattaactgttcttcatgct
ggtggaaaatttgataaagatacttataaagtttctgggggacttcacggtgttggggtt
tctgttgtaaatgcattatcaaaacacttaaaaatgacaatttatagagaaggaaaaatt
cattatcaagaatttaaatgcggtattcctcaaggttcattggaagttattggagatagt
ccaagaaaaactggtactacaattgaatttttagctgatgattctatttttgaagttact
aaatacgaatttgcagtattagcaaaaagatttagagaagttgcttatttaaactctttt
atatctataactttagataatgaaataactaaaactaaagaagtttatcactttgaaggt
ggaattaaacaatttgttgaagatttaaataaagatactgcaatttgtgattctgttgca
tttaatgataatattgatggtgttgaagttgatattgcagttatgtataatgaaacttat
gttgaaaaaactttatcatttgtaaataatatcagaacaattgacggaggaactcatgaa
gctggatttaaagcaggtcttacaagaagtattgttaaatatttaaatgagaatgcagca
gcacgtgaaaaagatacaaaaattactggtgatgacgtaagagaaggtttaattgcagtt
gtttcagtaaaagttcctgaacctcaatttgaaggacaaacaaaaagtaaattaggttct
tcttatgtaaaagcaattactcaaaaattaactggtgatgcattagataaatattttgaa
gaaaatccaactcaagctaaagctattatggaaaaagctttaatggctgcacgaggtaga
gaagctgctaaaaaagcaagagatttaactagaaaaaaagatgcaatgacagttggaaca
cttccaggtaaacttgcagagtgtcaaagtaaagatccagcaattagagaattatatctg
gttgagggagattctgctggaggttcagcaaaacaaggaagagatagagttttccaagca
attttaccactaaaaggtaaaattttaaatgttgaaaaaagtagacttgataagattctt
aaatctgatgaaattagaaatatgattacagctttaggttgtggaattggtgaagatttt
gatgatgaaaaaataagatatcataaaattataattatgacggatgccgatgttgatggt
agtcatattcaaactttattattaactttcttttttagatttttaagacctgtagttgaa
aaaggttatttatatattgcacaaccaccactttatagatataaaaaaggtaaaaatgaa
atatatttaaaagatgatacagcattatctgcatttttaattgaaaatggtttagaatca
tttacttttgaaggtttaggttacaatgatttacttgatttatttaaaattgttgcaaga
tatagaagtatgttaggacaattaggaaaaagatattctttacttgaagttttaaaatat
ttaattgaaaataatgaattagttaatttagatttttcatctttatatgaaaaagtaaaa
gaatttttagatgctaaaggttataacatcttatcaaaaactgttcttgatgataaaatt
caattatttgttcaaacaaatgaaggtttagaagaattaataattgatgaagagttattt
gcatcaccatattttagtgaagctacatacatttataataaactaatagaaagagattta
actgtttttgaaggaagagatttattagaaatattagatgatatagaaactcttgctaaa
aaaggtgcatatattcaaagatataaaggtttaggggaaatgaatcctgaacaattatgg
gaaacaactatgattcctgataatagaagacttttaagagtaaaaattgaagatgcagaa
attgcttcagatacatttactttatttatgggtgatgaagtagaaccaagaagaaattat
attgaagaacacgcaaaagacgttgaacacttagacgtttaa
DBGET
integrated database retrieval system
