Arcobacter defluvii: ADFLV_2894
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Entry
ADFLV_2894 CDS
T06891
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
adz
Arcobacter defluvii
Pathway
adz03030
DNA replication
adz03430
Mismatch repair
adz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ADFLV_2894 (dnaE)
03430 Mismatch repair
ADFLV_2894 (dnaE)
03440 Homologous recombination
ADFLV_2894 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adz03032
]
ADFLV_2894 (dnaE)
03400 DNA repair and recombination proteins [BR:
adz03400
]
ADFLV_2894 (dnaE)
Enzymes [BR:
adz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ADFLV_2894 (dnaE)
DNA replication proteins [BR:
adz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ADFLV_2894 (dnaE)
DNA repair and recombination proteins [BR:
adz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ADFLV_2894 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF4494
Motif
Other DBs
NCBI-ProteinID:
QKF78864
UniProt:
A0AAE7BJ51
LinkDB
All DBs
Position
2908237..2911800
Genome browser
AA seq
1187 aa
AA seq
DB search
MSQIPQFTHLHLHTEFSLLDGANKIKPLAKKVKKMGMTSVAMTDHGNMFGAIAFYNAMRD
EGIKPIIGMEAYIHNSDDIGDKTNRQRYHLCLYAKNDIGYKNLMFLSSQAYMHGFYYYPR
INKKLLRENSEGLVCSAACLQGEVNWHLNTQNERNVKNGAKGYEEAKKIALEYKEIFGDD
FYLEIMRHGISDQHFVDDQILRISQETGIKVVATNDTHYLEQKDADAHEAFMCIAMNKLY
DDPNRLRHSVHEFYLKSPEQIAKLYADIPEAIEATQEIADKCNLTIKLGNPTPPNFKFTR
QKSAEAGLTLPEPELEYSLENDKILFMHECRMGLEDRLKIVPEEHHQEYRDRLEVEIEII
NNMKFPGYMLIVWDFVIVAKRMGIPVGPGRGSAAGSLVAFSLKITDIDPIPYGLLFERFL
NPERVSMPDIDMDFCQSRRGEIIDYVVQQYGRANVAQIITFGKLLAKGVIRDVARVLDMP
YAKADAMAKLIPDELGIDLKNSWEKEPKIKELCEADPQAARVWEYALALEGLNRNAGTHA
AGVVISNEPLWKKTPLFKPSGLDTLATQYNGKYVEDVDLIKFDFLGLKTLTVIEEANKLI
EQRHGKRVNFITTDVNDKGVYDLIQTGNTIGLFQIESDGMQDLCKRLKPSNFEDVIAVLA
LYRPGPMESGMLDDFIDRKHGRAQINYFYDEFDGPLRPILETTYGVIVYQEQVMQIVQSI
GGFSLGGADLVRRAMGKKIKEEMDRLKGEFADGGVKKGFVKEHCEELFDLIVKFAGYGFN
KSHSAAYALVTFYTSYLKCYYPAEFMAALLTLEKDNTDKVVKYVDEVKRLGLDLFPPDIN
KSDLVFSAKQIDGKEVVMFGMGAIKGAGDVAIKSILNARNDGPFTDLADFISRIDGSKVN
KRVIESLTKAGAFDSFGYSRRALLDQIEKIVETVGKAATAKKMATGSLFGDSDELTKIDI
ELEHIPEFDPKDILELEKASLGFYVSGHPLDEYREQIDKINYTLSSQIDELDDGSQALFV
GKIENITEKISKKGNKFGIATIMDFHGTIELMLFEDRLKELKESYNLEEPIAFKVRISKD
ENFTRMNILKIETILDAQKEKVKTKQKEIQEPPLTIALPFSNDENTIYKLLEIVVENQGK
RELKLLIKSKLADLELETGFKVTSNIENLIYKIEGAYIVDETDTTNK
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaatacctcaatttacccatctacatttacatacagaattttcattacttgat
ggtgcaaataagattaaaccactagctaaaaaagtaaaaaaaatgggaatgacaagtgtt
gccatgacagaccatggaaacatgtttggagccattgctttttataatgctatgagagat
gaaggaataaaaccaattattggaatggaagcatacattcataatagtgatgatattggt
gataaaaccaatagacaaagatatcacttatgcttatatgcaaaaaatgatattggatat
aaaaatcttatgtttttgagctctcaagcttatatgcatggtttttactattatccaaga
attaataaaaaacttttaagagaaaactctgaaggtttagtttgtagtgcagcttgtttg
caaggggaagtaaactggcatttaaatacacaaaatgaaagaaatgtaaaaaacggtgca
aaaggttatgaagaagcaaaaaaaattgcacttgaatataaagagatttttggtgacgat
ttttatttagaaattatgcgtcatggaatttctgaccaacactttgttgatgatcaaatc
ttaagaatttcacaagaaactggaataaaagttgttgctacaaatgatacacactactta
gaacaaaaagatgccgatgcacatgaagcatttatgtgtattgcaatgaataaactttat
gatgatccaaatagactaagacatagtgttcatgagttttatctaaaatcgccagagcaa
atagcaaaactttatgcagatattcctgaagctattgaagctacacaagaaatagcagat
aagtgtaatctaactataaaattaggaaatcctactcctccaaatttcaaatttacaaga
caaaaatcagcggaagctggtttaacactacctgaacctgaacttgaatattctcttgaa
aatgacaaaattttatttatgcatgaatgtcgaatgggattagaagatagattaaaaata
gttcctgaggagcatcatcaagagtacagagatagacttgaagttgaaatagaaattatc
aataatatgaaattcccaggatatatgcttatcgtttgggatttcgttattgttgcaaaa
agaatgggtattccagttggtccaggacggggttcagcagcaggaagtttagttgccttt
tctttaaaaatcacagatattgaccctattccttatggtttactttttgagagattccta
aatccagaaagggtatccatgcccgatattgatatggatttctgtcaaagtagaagagga
gagattatagattatgttgttcaacaatacggtcgagctaacgttgctcaaattatcact
tttggtaagcttttagcaaaaggagttattagagacgttgcaagagttcttgatatgcct
tatgcaaaagctgatgccatggcaaaactaatacctgatgaattaggaattgatttaaaa
aactcttgggaaaaagaaccaaaaataaaagaactttgtgaagctgacccacaagctgca
agggtttgggaatatgctttagcattagagggactaaatagaaatgcaggaactcacgca
gctggagttgttatttcaaatgaacctttatggaaaaaaactccactttttaaacctagt
ggtttggatactttagcaactcaatataatggaaaatatgtagaagatgttgacttaatt
aaattcgactttttaggtttaaaaactctaactgttattgaagaagcaaataaactaatc
gaacaaagacatggaaaacgtgtaaatttcatcacaacagatgtaaatgacaaaggtgtt
tatgacctaattcaaacaggaaatacaattggactattccaaatagagtctgatggtatg
caagatttatgtaaaagattaaaaccatcaaactttgaagatgttatcgccgttcttgca
ctttatagaccaggtccaatggaatcaggaatgcttgatgactttattgatagaaaacat
ggtcgagcgcaaataaactatttctatgatgagtttgatggtccattaagacccatactt
gaaacgacttatggagttattgtttaccaagagcaagttatgcaaatcgtacaatctatt
ggaggtttctcacttggaggagccgacttagttagacgggctatgggtaaaaaaatcaaa
gaagagatggatagactaaaaggtgagtttgcagatggtggagttaaaaaaggatttgta
aaagagcattgtgaagaactatttgacctgattgtaaaatttgctggatatggatttaat
aaatctcactcagcagcctatgcacttgtaacattttatacttcatatttaaaatgctac
tatccagctgaatttatggcagcacttttaacacttgaaaaagataatactgataaggtt
gtaaaatatgtcgatgaagtaaaaagattaggacttgatttatttccacctgatatcaat
aaatctgatttagttttctcagcaaaacaaattgatggaaaagaagttgttatgtttgga
atgggagcaattaaaggggcaggagatgtagctataaaatctatattaaatgcaagaaat
gatggtccatttactgatttagcagattttatttcaagaattgatggaagtaaagtaaat
aaaagagttattgagtctcttacaaaagcaggagcttttgatagttttggatactcaaga
cgtgcacttcttgatcaaattgagaaaattgttgaaacagtaggtaaagctgcaactgca
aaaaaaatggcaacaggttcactttttggagatagtgatgaattaacaaaaattgatata
gaacttgaacatattcctgaatttgacccaaaagatattttagaacttgaaaaagcatct
ttaggtttttatgtttcaggacatccacttgatgaatatagagaacaaattgataaaatc
aactatactctatcatctcaaattgatgaacttgatgatggtagtcaggctttatttgtg
gggaaaattgaaaatataactgaaaaaatatctaaaaaaggcaataagtttggaattgca
acaattatggatttccatggaacaatcgaacttatgctttttgaagatagattaaaagag
ttaaaagaatcatataaccttgaagaacctattgcttttaaagtaagaatttcaaaagat
gaaaattttacaagaatgaatatcttaaaaattgaaactattttagatgctcaaaaagaa
aaagtaaaaacaaaacaaaaagagattcaagaaccaccattgacaatagcattacctttt
tcaaatgatgaaaatacaatatacaaactactagaaattgtagttgaaaatcaagggaaa
agagaattaaaacttctaataaaatcaaaattagcagacctagaacttgaaacaggtttc
aaagtaacatcaaatatagaaaatttaatatacaaaatagaaggagcttatatagtagat
gaaacagatactactaacaaatga
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