Aeromonas sp. ASNIH3: C2U39_00090
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Entry
C2U39_00090 CDS
T05427
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aea
Aeromonas sp. ASNIH3
Pathway
aea03420
Nucleotide excision repair
aea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2U39_00090
03430 Mismatch repair
C2U39_00090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aea03400
]
C2U39_00090
Enzymes [BR:
aea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U39_00090
DNA repair and recombination proteins [BR:
aea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2U39_00090
MMR (mismatch excision repair)
Other MMR factors
C2U39_00090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AUV10726
LinkDB
All DBs
Position
21585..23756
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDT
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANSVIANN
SERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRNNARDQGQNLWQSAKTLLNDKVLTGRAGNAVRGFVDLIDALEEQVSLLPLHQQ
ADIVIQHSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEYPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGIVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaatgacaagcaaagagacgcggtggcggcc
ccccgttgcaacctgctggtgctggcgggcgccggttcgggcaagacccgggtgctggtg
caccgtatcgcctggctgatgcaggtggaacgctgttcacccttctccatcatcgcggtc
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgaaaaagtgatcggcgac
ggcgtgcgcggcatgtggatcggcaccttccacggcatcgcccaccgcctgctgcgggcc
caccatctggatgcggggctgccgcaggatttccagatcctcgactccgacgaccagtac
cgcctcattcgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccgcgc
gccgtgatgggctacatcaacggcaagaaggacgagggcttgcgccccggcgacatcgac
ctttacggcgaccccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccggtctggtggacttcgcagaactcctgctgcgcgcccacgagctgtgg
ctcaacaaaccgcacatcctcgagcactaccgcgaccgcttccagaacatcctggtggac
gagttccaggacaccaacggcatccagtacgcctggctgcggatgctggccggcgacacc
ggcaaggtgatgatagtcggtgacgatgaccagtccatctatggctggcgcggcgccaag
attgagaacatccagcgcttcctgaccgactatcagggcgccgagaccattcgcctcgag
cagaactaccgctccaccgccaatatcctcaaagccgccaacagcgtcatcgccaacaac
tcggagcggctcggcaaggagctgtggaccgaaggggccgagggcgagccgatctccctt
tacgccgccttcaacgaggtggacgaggcccgcttcgtggtcggtcgcctcaaggactgg
aaagagaagggggggctgctcgccgactgcgccatcctctatcgctccaacgcccagtcc
cgggtgctggaagaggcgctgatgcaggacgccatgccgtaccgcatctacggcggcctg
cgcttcttcgagcgccaggaaatcaaggacgccatggcttacctgcgccttatcaacaac
cgtggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgcggcatcggcgat
cgcaccctcgagatcctgcgcaataacgcccgggatcagggccagaacctctggcagtcc
gccaagaccttgctcaatgacaaggtgctgaccggccgtgccggcaacgcggtgcgcggc
tttgtggatctcatcgacgcgctggaggaacaggtctccctgctgcccctgcaccagcag
gcggacatcgtcatccagcactccggcctcaaggcgatgtatctggcggaaaaaggcgag
aaatcccaggcgcgggtagagaacctggacgaactggtcaccgcttgccgtcagtaccag
cgcccggacgagctggaggacatgagcgatctctccgccttcctcgcccatgcagcgctg
gagtccggcgagaatcaggcggacgaatacgccgacgcggtgcagctgatgacattgcac
agcgccaaggggctggaatatcccctggtgctgctggtcggcgtcgaagagggcatgttc
cccagccagcaatccaccgaggagtcggggcggctggaggaagagcgccgcctctgttac
gtcggcatgacccgcgccatggagaagctctacatctgttatgccgagagccgccgcatc
tacggccgcgagatgttccacaagccgagccgctttatccgcgaaatgcccgccgagtgt
ctggaagagatccggctgcgcacccaggtgagtagacccacgcaatatggccgctttagc
cagaacgaggtgcagcagagctttgacgccagcggcatcaagctcggccagcgggtgctc
catccgaaattcggcgaaggaatcgtgctcaacttcgaaggggtcggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggttggtgacggcatatgccagactg
gaagcactctga
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