Aeromonas sp. ASNIH3: C2U39_01855
Help
Entry
C2U39_01855 CDS
T05427
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aea
Aeromonas sp. ASNIH3
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aea03016
]
C2U39_01855
Enzymes [BR:
aea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C2U39_01855
Transfer RNA biogenesis [BR:
aea03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2U39_01855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AUV11052
LinkDB
All DBs
Position
complement(356630..358651)
Genome browser
AA seq
673 aa
AA seq
DB search
MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQAVTRFVGRVKMFRDRLNVVPDHPLIKDAIKARAKKGLDE
KSFKEGDWVVATLKRHALVDGNFSAEITQLIATQEDHNVPWWVVLARHNLAQIEPADLPE
WKVIEEEELPRRDLTQVPFFTIDGAKTKDMDDALAITKLENGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARINSHARLSYDDVSDWAEHGKALDIDAGVLAQLPLMKAMTEARIKWRTEHALVFPD
RPDYDFELGEDGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKEVGYGIFNVHTGFD
EESLDGAIELLKTAEAPFEKEEIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSLELTEHLTACRRLHR
MVERDIGDWLYVRYLKADAGTDKVFNAEIIDVMRAGLKLRLQENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVDLVPGPAPVSPASE
ADAAPADEAPKAQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgtgatccgcgcctccgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgcctccctacatgaagaaggtgatgcacggtgaccgggtg
agcgccctgatccgcactgaaaaagagaaagaggtggccgagccggatgccctgctggaa
caggccgtcacccgcttcgtcggccgcgtcaagatgttccgcgaccgcctcaacgtggtg
cccgaccaccccctcatcaaggacgccatcaaggcccgcgccaagaagggtctggacgag
aaatccttcaaggaaggggactgggtggtcgccaccctcaagcgccatgccctggtggac
ggcaacttctccgccgagatcacccagctcatcgccacccaggaagatcacaacgtgccc
tggtgggtagtgctggcgcgccacaacctggcccagattgaaccggcggacctgccggag
tggaaggtgatcgaagaggaagagctgccccgccgggatctgacccaggttcccttcttc
accatcgacggtgccaagaccaaggacatggacgatgccctggccatcaccaagctggag
aacggctgggagctgctggtggccatcgccgacccgaccgcctatgtggccgaggggagc
gagctggacaaggaggccgcccagcgcgccttcaccgtctacatgccgggacgcaacgtg
cccatgatcccgcgcaccctctccgacgagctctgctccctgaaagagggcgaggagcgc
aacaccctgtgcgcccgtctgctcatcgccgaggacggcctgctgctggaggagaccgag
ttcttcgccgcccgcatcaattcccatgcccgtctcagctatgacgacgtctccgactgg
gccgagcacggcaaagcgctggatatcgacgccggcgtgctggcccagctgcccctgatg
aaggcgatgacggaggcccgcatcaagtggcgtaccgagcacgccctggtgttcccggac
agacccgactacgacttcgagctgggtgaagacggcgaagtgctggccatccacgtggag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgcc
ggccgcgtgctgggcaaagaggtcggctacggcatcttcaacgtccacaccggctttgac
gaggagtccctggacggcgccatcgagctgctcaagaccgccgaggccccgttcgagaag
gaagagatcgccagcctctccggcttctgcgccctgcgccgctggatagacaacctggac
acccgctggctggacggcaagatccgccgcttccagagctatgccctgatgtccgccgaa
ccgggcgcccactacggcctgggtctggatgcctatgccacctggacctcccccatccgc
aaatacggcgacatggtcaaccatcgcctgctgaaagccgtcatcgccggcaagaccccg
ggcgagcgccccagcctggagctgaccgagcacctgaccgcctgccgccgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtgcgctacctcaaggccgatgcgggc
accgacaaggtgttcaacgccgagatcatcgacgtgatgcgcgccggcctcaagctgcgc
ctgcaggagaacggcgccgtggtcttcatgcccgcccgccatatcctggacaacaaggat
cggctggagtgcaactgggacaacggtcgcgtctatctggacaagaccgaggtggtctac
gagctcggccagatcatcgaggtgaagctgaccgaggcggtggaagagacccgctccctc
atcgccaagccggcggtggatctggtgccgggtccggcgccggtctcccctgccagcgag
gccgatgccgcgcctgccgacgaggcccccaaggcgcagtga
DBGET
integrated database retrieval system
