Aeromonas sp. ASNIH3: C2U39_05355
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Entry
C2U39_05355 CDS
T05427
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aea
Aeromonas sp. ASNIH3
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aea03016
]
C2U39_05355
Enzymes [BR:
aea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C2U39_05355
Transfer RNA biogenesis [BR:
aea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C2U39_05355
Prokaryotic type
C2U39_05355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AUV11655
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All DBs
Position
1072370..1073320
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AA seq
316 aa
AA seq
DB search
MSRRRRFKGRDVHGILLLDKPTGLTSNDVLQKVKRIYNAAKAGHTGALDPLATGMLPICL
GEATKFSQYLLEADKRYEVTAKLGERTNTSDSDGEVVSTRPVNVAVGTLIEALDQFRGPI
MQVPSMYSALKHNGRPLYEYAREGIEIEREARPITIFELKLLGFEGNEVKLEVHCSKGTY
IRSLVDDLGEVLGCGAHVTQLRRTQVASYPYERMLTLEQLECIFEQAKAESIPPREQLDP
LLLPMDTAVASLPEVNMLVAVAAYVNQGQAVQVAGSPQSGQVRMTVGPEREFIGVGEIDD
EGRVAPKRLVRYHDEE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtagacgtcgtttcaaaggccgtgacgtacacggcatcctgctgctggacaaa
ccgaccggcctgacttccaacgatgtgttgcagaaggtcaagcggatctacaacgccgcc
aaggctggccataccggcgccctggaccccctggccaccggcatgttgccgatctgcctc
ggggaggccaccaagttctcccagtatctgctggaagcggacaagcgctatgaagtgacc
gccaagctgggcgagcgcaccaataccagcgactccgacggcgaggtggtctccacccgt
ccggtgaacgtggccgtgggtaccctgatcgaggcgctggaccagttccgcggccccatc
atgcaggtgccgtccatgtactccgccctcaagcacaacggccgtccgctctacgaatat
gcccgtgaagggatcgagatcgagcgggaagcccgtcccatcaccatcttcgaactcaag
ctgctcggcttcgaggggaacgaggtgaagctggaagtgcattgcagcaagggtacctat
atccgttccctggtggacgatctcggtgaagtgctgggctgtggcgctcacgtcacccag
ttgcgtcgcacccaggtggcgagctacccctacgagcggatgctgaccctggagcagctc
gagtgtatcttcgagcaggccaaggccgaaagcattccgccacgggagcagctagatccc
ctgctgctgccgatggacaccgccgtggcctccctgcccgaggtaaacatgctggtcgcc
gtggccgcctatgtgaaccagggtcaggccgtgcaggtggcaggtagcccccaaagtggc
caggtccgcatgacggttggcccggagcgcgaattcatcggggttggcgagatcgatgac
gaggggcgcgtggcgcccaagcgtctggttcgctaccacgacgaggagtga
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