Aeromonas sp. ASNIH3: C2U39_06220
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Entry
C2U39_06220 CDS
T05427
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aea
Aeromonas sp. ASNIH3
Pathway
aea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2U39_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aea03400
]
C2U39_06220
Enzymes [BR:
aea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C2U39_06220
DNA repair and recombination proteins [BR:
aea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2U39_06220
Prokaryotic type
C2U39_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AUV11804
LinkDB
All DBs
Position
1247360..1248040
Genome browser
AA seq
226 aa
AA seq
DB search
MLTWKDVIGSEKEQAYFMDTLATVRAEREAGKVIYPPATEVFNAFKLTELDDVKVVILGQ
DPYHGPDQAHGLCFSVLPGVRTPPSLVNIYKEMQRDLPGFVTPHHGFLESWARQGVLLLN
TVLTVQAGMAHSHAHLGWETFTDRVIERINAHCQGVVFLLWGAHAQKKGRFIDRSRHHVL
SAPHPSPLSAHRGFIGCGHFSEANRLLVQQGRSPIDWLSVCADPAA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacctggaaagatgtgattggttcggagaaagagcaggcgtatttcatggatacc
ctggccaccgtcagggccgagcgggaggcgggcaaggtgatctatcccccggcgaccgag
gtattcaatgccttcaaactgaccgagctggatgacgtcaaggtggtgatcctggggcag
gatccctatcacggcccggaccaggcgcacggcctctgcttctccgtcttgcccggagtg
cgcacgccgccgtccctcgtcaacatctacaaggagatgcagcgggatctgccgggtttt
gtcacaccccatcatggctttctggagtcctgggccagacagggagtgctgctgctcaat
acggtgctgacggtacaggcgggcatggcgcactctcacgcccacctggggtgggagacc
tttaccgatcgggtcatcgagcggatcaatgcccattgccagggcgtcgtcttcctgctg
tggggcgctcatgcccagaagaaagggcgcttcatcgaccggtcgcgccaccatgtgctg
agcgccccccatcccagtccgctctctgcccatcgcggtttcatcggttgcggccacttc
tccgaggccaatcgcctgctggtccagcagggacgcagtcccatcgactggctctcggtc
tgcgccgatccggcggcctga
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