KEGG   Aeromonas sp. ASNIH3: C2U39_08875
Entry
C2U39_08875       CDS       T05427                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
aea  Aeromonas sp. ASNIH3
Pathway
aea03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:aea00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C2U39_08875 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:aea02044]
    C2U39_08875 (icmF)
Secretion system [BR:aea02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C2U39_08875 (icmF)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical AAA_16 Wzy_C_2 MlaC AAA_18
Other DBs
NCBI-ProteinID: AUV12277
LinkDB
Position
1827632..1831117
AA seq 1161 aa
MFKTIFTFLRQQLPKLKPSWPLLGAVLWVLALILVWWLAPRLELRGAKPFAPLWGRVVFT
LLWLWLLLGVVSWRVWRKMQQLKAERQHEVVLEQDPVKGLIDRQALFLDRWLQALNTHLG
KGALYAMPWYLVLGLPGSGKSSLIHRANPANKLNPRLDTELRDVAQDQLVDCWLGEQAVM
LDPAGVLLSQSEAELDPQARKHERLWLHLLGWLNEHRRRQPLNGLVLTVDLAWLSHASVA
ERKAYAQLMRSRLQEVSATMNTRLPLYVTFTKLDLLRGFEVIYQQLDKEAREAVLGVTFK
PGADWQQDLALFWDQWVDNLNQNLPELMLSRLDAAQRNALFSFVRQLAGLKDYVTSLLAE
TLAIEESKPLLVRGVYVSSVYQQGVPFDAFAQAASRRYNLPEPIHSALRGESNTYFVRQL
FSSIIFPEAHLAGENRLHTLYRRRRMAIGLSCLSLFSAALIGGWHYFYRVNEEAGRNVLT
KAQAFMETNEVADAHAFGVSQLPRLNLIREATLSFGNYRERMPLVADLGLYQGDQIGPYV
EGSYLQLLSLRFLPAQMQGLLEDLNQAPAGSEEKLAILRVMRMLDDASGRNKELVAQYMA
SRWQKAFPGQGAVQEQLMGHLDYALDHTNWYGARAERDQAAITAFVPFKEPVYGAQRELG
KLPMYQRVYQNLVVKAGDVLPPDLNVRDEVGPTFDTVFALRSDNAGQVPRLLTWPGFNDF
FLKQDKALIDLTAMDAWVLGQRKLSQLSEADRKEITRQVNDRYVTDYVNQWQKLLTNLDV
QTLESPVQALDVLAAITGNDQPFQRVLASLDDNTRIRKISDVEGDPAQAISARIGRPFMA
TNGVLAGRGEQGPLIQEVNQKLVELQHYLELIVNATEPGQSALKAVQLRMTNKYADPVFA
LQQYARSLPAPLDRWVGQLSEQSSRLVIDLAMSSLNQEWQDKVLTPFNSQLAGRYPFDPS
SNKDVPLSEMERFFAPNGTLDSFYQVNLKPMVESGLMEGEFSSPIQAELVKQLDRAARIR
QIFFSQQGNLEVQFALEPIELTANKRRSVLNLDGQLLEYAHGRRTKIPLVWPNTMRDGAE
SKITLVPAARERSPRSEGFVGPWAMFRLMDKGELTQVNDATFDVRFPVDQGAMTYRVYTD
SAQNPFTGGLFSQFRLPESLY
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgttcaaaaccatttttacttttctgcggcaacagctgccgaaattgaaaccctcctgg
cccctgctcggtgctgtgctctgggtgctcgctctcatcctggtgtggtggctggcccct
cgtctcgagctgcgcggcgccaagccgttcgcgccgctgtgggggcgggtggtgttcacc
ctgctctggctctggctgctgctgggagtggtctcctggcgggtgtggcgcaagatgcag
cagctcaaggccgagcgccagcacgaggtggtgctggagcaggatccggtcaaggggctc
atcgacaggcaggcgctgttcctcgatcgctggctgcaggcgttgaatacccatctgggc
aagggggcgctctacgccatgccctggtatctggtactgggcctgcccggcagcggcaag
agcagcctcattcaccgcgccaacccggccaacaagctcaacccgagactcgataccgag
ctgcgggacgtggcgcaggatcagctggtggattgctggctgggggaacaggcggtgatg
ctggatcccgccggtgtgctgctctcccagagcgaagccgaactggatccgcaggcgcgc
aagcatgagcggctctggctgcatctgcttggctggctcaatgaacaccgtcgtcgccag
cccctcaacggcctggtgctgaccgtggatctggcctggctctcccacgccagcgtggcc
gagcgcaaggcttatgcccagctgatgcgctcacgcctgcaggaggtgtcggccaccatg
aatacccggttgccgctctatgtcaccttcaccaagctcgatctgctgcgcggctttgag
gtgatctaccagcagctcgacaaggaggcccgggaggccgtgctgggggtgaccttcaag
ccgggcgccgactggcagcaggatctggccctgttctgggatcagtgggtggacaacctc
aaccagaatctgcccgaactgatgctgagccggctcgatgccgcccagcgcaacgcgctg
ttctcgttcgtgcgccagctggcgggcctcaaggattacgtgaccagcctgctggccgag
accctggccatcgaggagagcaagccactattggtgcgcggggtctatgtcagctccgtc
tatcagcaaggggtgccgttcgatgcgtttgcccaggcggcctcccgtcgctacaacctg
ccagagcccatccactcggccctgcgcggggagtccaacacctatttcgtgcgccagctt
ttctcctccatcatcttcccggaggcccatctggctggcgaaaaccggctgcacaccctc
tatcgccggcgccgcatggccatcggcctcagctgcctgtcgctcttctcggccgccctc
atcggtggctggcactacttctaccgggtcaacgaggaggcgggccgcaacgtattgacc
aaggcccaggccttcatggagaccaacgaggtggccgatgcccacgccttcggggtgagc
cagctgccgcgcctcaacctcattcgcgaggcgaccctctcctttggcaactaccgcgag
cggatgccgctggtggcggacctcggcctctaccagggggaccagattggtccttatgtg
gaaggctcctacctgcaactgttgagcctgcgcttcctgccggcccagatgcaggggttg
cttgaggatctcaaccaggcacctgccggcagcgaggagaagcttgccatcctgcgggtg
atgcggatgctggacgatgcgtccggtcgcaacaaggagctggtggcgcagtacatggcg
agccgctggcagaaggccttcccggggcagggggcggtgcaggagcagctgatggggcac
ctggactatgccctcgaccacaccaactggtatggcgccagggccgagcgggatcaggcc
gccatcaccgccttcgtgccgttcaaggagccggtttacggtgcccagcgcgagctcggc
aagctgcccatgtatcagcgggtctaccagaatctggtggtgaaggccggtgatgtgttg
ccgccggatctcaacgtccgtgacgaggtgggccccaccttcgacacagtgtttgccctg
cgcagcgacaacgccggccaggtgccgcggctgctcacctggcccggtttcaacgacttc
ttcctgaaacaggacaaggcgctcatcgatctcaccgcgatggatgcctgggtgctgggc
cagcgcaagctgagccagctgagcgaggcggatcgcaaggagatcacccgtcaggtcaac
gaccgttacgtcaccgattacgtcaaccagtggcaaaaactgctgaccaatctggacgtg
cagaccctggagagcccggtgcaggcgctggacgtgctcgccgccatcaccggcaacgat
cagccgttccagcgggtgctggcctcgctggatgacaacacccgcattcgcaagatctcc
gatgtggaaggggacccggcccaggccatcagcgcccgcatcggtcgtccctttatggcc
acgaatggagtattggctggacgtggtgagcaggggccgctcattcaggaggtcaaccag
aagctggtggagctgcagcactatctcgagctcatcgtcaacgccaccgagccgggccag
tccgccttgaaagcggtgcagctgcgcatgaccaacaagtacgccgatccggtgttcgcc
ctgcagcaatatgcccgcagtctgccggccccgctcgatcgctgggtgggtcagctctcc
gagcagagctcgcgactggtgatcgacctggctatgtcctccctcaaccaggagtggcag
gacaaggtgctgacccccttcaacagccagctggccggccgttatccgtttgatccaagc
tcgaacaaggacgtgcccctctccgagatggagcgtttcttcgcacccaatgggacgctg
gacagcttctatcaggtcaacctcaaacccatggtggagagcggcctgatggaaggggag
ttcagctcgcccatccaggccgagctggtgaagcaactggaccgtgctgcccgcatccgt
cagatcttcttcagtcagcagggcaacctggaggtacagttcgccctcgagcccatcgag
ctcaccgccaacaagcggcgcagtgtgctgaacctggacggccagctgctggagtacgcc
catggccgccgtaccaagatcccgttggtgtggcccaacaccatgcgcgacggggccgag
agcaagatcaccctggtgccggccgcccgcgagcgctcaccgcgcagcgaaggcttcgtc
ggcccctgggccatgttccgcctgatggacaagggggagctgacccaggtcaatgacgcc
actttcgatgtgcgcttcccggtggatcagggggccatgacctatcgcgtctacaccgac
agcgcgcaaaaccccttcaccggcggcctgttcagtcagttcagactgcccgaatccctc
tattga

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