Aeromonas sp. ASNIH3: C2U39_09425
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Entry
C2U39_09425 CDS
T05427
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
aea
Aeromonas sp. ASNIH3
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aea03009
]
C2U39_09425
Ribosome biogenesis [BR:
aea03009
]
Prokaryotic type
ribosomal protein modification factors
C2U39_09425
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GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AUV12376
LinkDB
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Position
complement(1966839..1968599)
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AA seq
586 aa
AA seq
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MTDHTFIPGKDAALEDSIERFQTKLQALGFDIEEASWLNPVPNVWSVHIRDKECALCFTN
GKGASKKAALASALGEYFERLSTNYFFADFYLGEQVANGDFVHYPNEKWFPIEGDQLPTG
LLDSFTRKFYNPDGEVTADMLVDLQSGNEERGIVALPFERQSDHQTVYIPMNIVGNLYVS
NGMSAGNTRTEARTQGLSEVFERHVKNKIIAEAISLPQIPGEVIARYPGIKASIDALEAE
GFPIYSFDASLGGRYPVICVVLLNPSNGTCFASFGAHPRFEVAFERTVTELLQGRSLKDL
DVFVPPSFDNEQVADHHNLETHFIDSSGLISWDLFKEESDFEFADWDFRGTSQEEFDHLI
GIFHELEQPVYIADYEHLGVYACRILVPGMSDIYPVEDLLLANNTMGAHLRETILALPAL
EWDAEQYMALFDQLDEEGHDERTRVRELLGIAAAKGTALHTLRVGELKAMLALAAGDLES
ALDLIDWTMEFNQSVFPADRAAYYRALRACVELFLDEDRDPEQYRPVFARMFGEETLAQA
WANARGEARFHGLEAADLSLSQFPLHQKLLAAYEKLQKAKRIHTWN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccacacttttattcccggcaaggacgcagcgctggaagactccatcgaacgc
ttccagaccaagctgcaagccctggggtttgatatcgaagaggcctcctggctcaacccc
gtgcccaacgtctggtccgtgcacatccgggacaaggagtgcgccctctgcttcaccaac
ggcaagggtgccagcaagaaggcggcgctcgcctccgcccttggcgagtatttcgagcgt
ctctccaccaactacttcttcgccgatttctacctgggcgagcaggtcgccaatggcgac
ttcgtccactacccgaacgagaagtggttccccatcgagggggatcagcttcccactggt
ctgctcgactccttcacccgcaagttctacaacccggacggtgaagtgaccgccgacatg
ctggtggacctgcaatccggcaacgaggaacgcggcatcgtcgccctgcccttcgagcgc
cagtctgatcaccagaccgtctacatcccgatgaacatcgtcggcaacctgtatgtttcc
aacggcatgagcgccggcaacacccgcaccgaagcccgcacccaggggctgtcggaggtg
ttcgagcgccacgtgaagaacaagatcatcgccgaggccatcagcctgccccagatcccg
ggcgaggtcatcgcccgttaccccggcatcaaggcgtccatcgatgcactggaggccgaa
ggcttccccatctacagcttcgatgcctccctcggcggccgttatccggtcatctgcgtg
gtgctgctcaacccgagcaacggcacctgctttgcctccttcggcgcccacccgcgcttc
gaggtcgccttcgaacgcaccgtcaccgaactgctgcaagggcgcagcctcaaggatctg
gacgtcttcgtaccgccgtcgtttgacaacgagcaggtggcggatcaccacaacctggag
acccacttcatcgactcctccggcctcatcagctgggatctgttcaaggaagagtccgac
ttcgagtttgccgactgggacttccgtggcacctcgcaagaagagttcgaccacctgatc
ggcatcttccacgagctggagcagccggtctacatcgccgactacgagcacctgggtgtc
tacgcctgccgtatcctggtgcccggcatgtccgacatctatccggtggaagatctgctg
ctggccaacaacaccatgggggcccacctgcgggagaccatcctggcgctgccggcgctc
gagtgggacgcagagcagtacatggccctgttcgaccagctggatgaagagggtcacgac
gagcggacccgggtgcgcgagctgctcggcatcgccgccgccaagggcactgccctgcac
accctgcgcgtcggtgagctcaaagccatgctggcgctggccgcaggcgacctggagagc
gccctcgacctcatcgactggaccatggagttcaaccagtcggtgttcccggcggatcgc
gccgcttactaccgcgccctgcgcgcctgcgtcgagcttttcctcgacgaggatcgagac
cccgagcagtaccgcccggtgttcgcccgcatgttcggggaagagaccctggcacaggcg
tgggccaacgcccgcggcgaggcgcgcttccacggtctggaagccgccgatctctccctc
tcccagttcccgctgcaccagaaactgctggccgcttacgagaaattgcaaaaagccaaa
cgaatccatacctggaactga
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