Aeromonas sp. ASNIH3: C2U39_10955
Help
Entry
C2U39_10955 CDS
T05427
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aea
Aeromonas sp. ASNIH3
Pathway
aea03030
DNA replication
aea03430
Mismatch repair
aea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U39_10955 (holB)
03430 Mismatch repair
C2U39_10955 (holB)
03440 Homologous recombination
C2U39_10955 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aea03032
]
C2U39_10955 (holB)
03400 DNA repair and recombination proteins [BR:
aea03400
]
C2U39_10955 (holB)
Enzymes [BR:
aea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U39_10955 (holB)
DNA replication proteins [BR:
aea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U39_10955 (holB)
DNA repair and recombination proteins [BR:
aea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U39_10955 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
Mg_chelatase
nSTAND3
QueC
Motif
Other DBs
NCBI-ProteinID:
AUV12634
LinkDB
All DBs
Position
2291232..2292179
Genome browser
AA seq
315 aa
AA seq
DB search
MYPWLIPDWHALSETARAGRLGHAWLLLGDPGLGKEQLAEQLARLHLCQHPQRGEPCGQC
HSCQLFEKGHHPDLGTLGPEGKTIGVEAIREICSRLQSTSQLGRGKVVIIQEAERMTESA
ANALLKTLEEPAGDSLLLLIASRVSRLLPTILSRCHKHVCQLPSEGETLAWLAEQGHQAT
QAQVRICQGAPLRVLSYIEAQQDDARRALLDGFVSLASAPTRAANVCDQLAEDNQVRLHW
LQLFLCDALKLQAGCGHHQLAMPDLASLSQQLAERHSSERLLEAEQQLVVLKETCQPGQL
SNPTIHLMNWLNRWL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtatccctggctgatcccggattggcatgccttgagcgagacggcccgggccggacgg
ctcggccacgcctggttgctgctaggcgatcccggccttggcaaggagcagcttgcagag
caactggcgcgactgcacctgtgtcagcatccacaacgaggtgagccctgcggtcagtgc
cactcctgccagctttttgagaaggggcatcacccggatcttgggaccctggggcccgag
ggcaagaccataggtgtcgaagccatccgggagatttgcagccgcctccagagcacgtcc
cagcttggtcgcggcaaggtggtgatcattcaggaggcggagcgcatgacggagtctgcc
gccaatgctttgctgaagacgctggaagagccggctggcgacagtctgttgctgctcatc
gcatcccgggtatctcgcctgctccccaccatcttgagccgttgtcacaaacatgtctgc
cagctcccctctgaaggtgagacccttgcctggctcgccgagcagggccatcaggccacc
caggcccaggtgcggatctgccagggtgcgccgctgcgggtgctgagctatatcgaagca
cagcaagatgatgccagacgggcattgctcgacggatttgtctcgctggcatcggccccc
acccgtgcggcgaatgtctgcgaccagttggccgaggataatcaggtccggctgcactgg
ttgcagctcttcttgtgcgatgccctcaagcttcaggctggctgcggccatcatcaactg
gcgatgccggatcttgcatcactcagccagcaactggctgagagacactccagcgaacgg
ctcctggaagctgaacagcagctggttgtgctgaaagagacttgtcagccagggcagctt
tccaatcccaccatccatttgatgaactggctcaatcgctggttataa
DBGET
integrated database retrieval system
