KEGG   Aeromonas sp. ASNIH3: C2U39_12065
Entry
C2U39_12065       CDS       T05427                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
aea  Aeromonas sp. ASNIH3
Pathway
aea03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C2U39_12065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aea03400]
    C2U39_12065
DNA repair and recombination proteins [BR:aea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C2U39_12065
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C2U39_12065
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 DUF87 UB2H AAA_22 Kinesin Microtub_bd
Other DBs
NCBI-ProteinID: AUV12835
LinkDB
Position
complement(2517917..2519929)
AA seq 670 aa
MSKLFQLASQFQPAGDQPRAIAQLLDGIESGLAHQTLLGVTGSGKTFTMANVIATLNRPT
MILAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALLERRDVVIVASVSAIYGLGDPQAYLSMMLHLKVGDVINQRDILRRLAELQ
YTRNDMAFQRGTFRVRGEVIDIYPAESDKLALRVELFDEEVESLSLFDPLTGAIEQTVVR
YTIYPKTHYATPRETILGAIEHIKEELKGRREQLMSLNKLVEEQRISQRTQFDMEMMQEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPGDGLLIIDESHVTVPQIGAMFKGDRSRKET
LVEYGFRLPSALDNRPLKFDEFEALMPQTVFVSATPGPYELEKSGGDVVQQVVRPTGLLD
PEVEVRLVTTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTEYLADHEVRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLIQTIG
RAARNLNGKVILYGDTITNSMKVAIEETERRRALQHAHNLEHGIVPKGLNKAIGDVMDMG
GSRTAGKAGKGSRKAAEPQGEYHARSASEISKEIKRMEEQMFQHARDLEFEQAAALRDQI
QRLRGELIAS
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgagcaagttattccagttggccagccagtttcaacccgccggggatcagccgagggcc
atcgcccagctgctcgatggcatcgagtcaggactggcccatcagaccctgctcggggtg
accggttcgggcaagacctttaccatggccaacgtcatcgcgaccctcaatcgtcccacc
atgatcctggcccccaacaagaccctggcggcccagctttacggggagatgaaggagttc
ttccccgacaacgcggtggagtatttcgtctcttattacgactactaccagcccgaagcc
tatgtgccgaccacggacaccttcatcgagaaggatgcttccatcaacgatcacatcgag
cagatgcggctgtcagccaccaaggcgctgctggagcggcgcgacgtggtgatcgtcgcc
tcggtatcggccatctatggtctgggggatccccaggcctacctcagcatgatgctgcac
ctcaaagtgggggacgtgatcaatcagcgggatatcctgcgccgcctcgccgaactgcag
tacacccgcaacgacatggccttccagcgcggcaccttccgggtgcggggggaggtgatc
gacatctaccccgccgaatcggacaagctggccctgcgggtggagctgtttgatgaagag
gtagaaagcctctccctgttcgatcccctgaccggcgccatcgagcagacggtggtgcgc
tacaccatctaccccaagacccactacgccaccccgcgggagaccatcctgggtgccatc
gagcacatcaaggaggagctcaaggggcggcgcgagcagttgatgagcctcaacaagctg
gtggaggagcagcgcatcagccagcgcacccagttcgacatggagatgatgcaggagctg
ggttactgctccggtatcgagaactacagccgctacctctccggtcgcgcgccgggtgag
ccgccacccaccctgtttgactacctgccgggggacggcctgctcatcatcgacgaatcc
cacgtcacggtgccgcagatcggcgccatgttcaaaggggacagatcccgcaaggagacc
ctggtggagtacggcttccgccttccctcggcgctggacaaccggcccctcaagttcgac
gagttcgaggcgctgatgccgcagacggtgttcgtctcggcgaccccgggcccctacgag
ctggagaagtccggcggtgacgtggtgcagcaggtggtgcgtcccaccggcctgctcgat
cccgaggtggaagtgcgactggtcaccacccaggtggacgatctgctctccgagatccgc
aagcgggtcgccgtggaggagcgggtgctggtcacgacactgaccaagcggatggcggag
gacttgaccgaatacctggcggatcacgaggtacgggtgcgctatctgcactcggacatc
gataccgtggagcgggtggagatcatccgcgacctgcgccttggcaagttcgatgtgctg
gtgggcatcaacctgctgcgcgaaggcctcgacatgccggaagtctccctggtggccatt
ctggatgcggataaagagggcttcctgcgctccacccgctccctcattcagaccatcggc
cgggcggcacgcaacctcaacggcaaggtgatcctctacggggataccatcaccaactcc
atgaaggtcgcgattgaagagaccgagcggcgccgcgccctgcaacacgcccacaacctg
gaacacggcatcgtgccgaaggggctcaacaaggccatcggcgatgtgatggacatgggg
ggcagccgcacggcgggcaaggccggcaaggggagtcgcaaggctgccgaaccgcaaggg
gagtaccatgcccgctctgccagcgagatcagcaaggagatcaagcggatggaagagcag
atgttccagcatgcgcgggatctggagttcgaacaggcggcggcgctgcgggatcagatc
cagcggctgcgcggcgagctgatcgcgtcatga

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