Aeromonas sp. ASNIH3: C2U39_15775
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Entry
C2U39_15775 CDS
T05427
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aea
Aeromonas sp. ASNIH3
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aea03400
]
C2U39_15775
DNA repair and recombination proteins [BR:
aea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U39_15775
Archaeal homologous recombinant proteins
C2U39_15775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
ABC_ATPase
MMR_HSR1
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUV13480
LinkDB
All DBs
Position
complement(3356423..3360178)
Genome browser
AA seq
1251 aa
AA seq
DB search
MKILSLSGENLASLTSQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRVWLARWAVRRAR
NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISVQTHERAREEQQKLAAISQRLGDVALMDEATREQWV
SQQISLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACQEGEAALAAAEAAHGAAAPEREE
FARAEQAQVARADHDELARLTLEVQQQEKALAELGPELGKLEEKTQQSALTEQQLLAEKI
AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGAQEREVQLTLEQGWRQQCQQVEQ
LKGQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDADRLQQLLTLREHKLRALRQLQ
HQLEQGQQERDYWQREQARLQQQQHELQEQQWEGRLAKAQEQWQGQTEQLGQLRQLLELA
DYGRNHGEQHGRLQQEIAQLEQALGKLAILGDELTPARERLALQRDEARHALEQSRAIAS
FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERVRSLELEWERLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGAELLGHPLPLRQSPIEWNELMSTL
LGRGQSLEQGLARSQQQLREAQQGQQQLQAVRQQLSQLASQHQQFEQQWQEADRQRIALE
GEVNAMGEQETTLRQRLEQGGSRLDEQMGGQPWRQWLGSQQWREWQRACEAWLHGQSEWE
RLTGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLVTSRATCLGGEEIALV
ESRWLQRLQQLASELETMQGAARTLRERQTELKTRLSHLEQEKQVSSRRRREVLGRWAAH
ASSLGIAEYDLRRLLAMSPDELKGRRAALQALEDARAEARTRLTERQRALALEESKRDRY
REHHPELAALAPQELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGTLQEELAAQ
QGVADHWQRLCDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGGESRVVLPG
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtcgctgtcaggggagaatctggccagcctgaccagtcaattcaccatc
gattttgccggtggcgccctgggggccgccggcctgtttgccatcaccggcaataccggc
gccggcaagagtaccctgctcgatgccatctgtctggcgctctacgacgagatgccgcgc
tttatcgccaatcgcaagaacgtggccgaagtgggtcgcatggatgacgaggagaagctc
aaggccaacgacgtgcgcggcatcctcagccgcggccacgccagcggttttgccgaggtg
cagtttcgcggctgtgacggccgtgtctggctggcccgctgggcggtgcgccgggctcgc
aaccgtgccgaggggcgctttcaggcccaggagcgcagcctgaccgacgtggcgtcgggc
caggtgttcagtggcagcaagcgggagctgcaggatcgcatcgacgagctggtgggactc
tcctgggagcagtttcgccgtgccgtcatcctgccgcagggggagtttgccgccttcctc
aagtcgagcgccgacgagcgttcggccctgctcgaacggatgaccggcaccgagctctac
tccgctatttcggtccagacccatgagcgggcgcgggaggagcagcagaaactggctgcc
atcagccagcggctcggtgacgtggcgctgatggacgaggcgacccgcgagcagtgggtg
agccagcagataagccttgccaccagcctcaaacacgagcagcagcaacagcagctgatg
caggacttgcgcgatctcaacggccgcatcgccgcccagttgcaggcctgtcaggagggg
gaagcggcccttgccgcggcggaggctgcccacggtgcggccgcccccgagcgggaggag
ttcgcccgcgccgagcaggcccaggtggcccgcgccgatcacgacgagctggcccgcctc
accctggaggtgcagcagcaggagaaggcgctggccgagcttggccctgaacttggcaag
ctggaggagaagacccagcagagcgccctcaccgaacagcaactgctggcggagaagatc
gccgccgagcgcgagtggggcgccctgcagcctgaactcaaacgggcgcaggagctcgac
acccgcattcgggaaaagcagcagcaactgcagaagatccagcaggagggggcgcaggag
cgggaggtgcagctcaccctggagcagggctggcgccagcagtgccagcaggtggagcag
ctcaagggccagcaccagcagtggggtgcctggcttgaggagcacaaggagctggcgccg
gtggcccgccagtggcagcccctgctcaccgccatgcaggattgggccgaggatgccgac
aggctgcagcaactgctcaccctgcgcgaacacaagctgcgcgccctcaggcagttgcaa
caccagctggagcaggggcagcaggagcgcgactactggcagcgtgagcaggcgcggttg
cagcagcaacagcacgagctgcaggagcagcagtgggaggggcgtctagccaaggcgcag
gagcagtggcaagggcagaccgagcagctgggccagctgcgccagctgctggagctggcc
gactatggccgcaatcacggcgagcagcatggtcgcctgcagcaggagatcgcccagctg
gagcaggcgctcggcaagctggcgatcctcggcgacgagctgacgccggcccgcgagcgg
ctcgccctgcaacgggatgaggcgcgtcacgcgctggagcagtcccgcgccatcgccagt
ttcgagcagcatcgccacatcctgcgcgacggtgaaccttgcccgctctgcggcgccgag
gagcacccctatcaccagagccagccacaggtggcgggcattctggggcaactggcggag
cgtgtccgcagcttggagcttgagtgggagcggctcaatcaccaatacattcagtgcgag
agcgagcgccaggagctggcccgccagctggcggtgcgccagcagcatctgcctgagctg
gagacgcgcgccgagcagctgacccagcgctggcagcagctgggcggtgccgagctgctg
ggccatccgttgccgctgcgtcagagcccgatcgagtggaacgaattgatgagtaccctg
ctcggtcgcggccagagtctggagcaggggctggcccgcagccagcagcaactgcgcgag
gcccagcaggggcagcagcagttgcaggccgtgcgccagcagctgagtcagctggccagc
cagcaccagcagttcgagcagcagtggcaggaggccgatcgccagcgcatcgctctggaa
ggggaggtgaatgcgatgggcgagcaggaaacgaccctgcgccagcgccttgagcagggg
ggcagccggctcgacgagcagatgggaggccagccctggcgtcagtggctgggcagccag
cagtggcgcgagtggcagcgggcctgcgaggcctggctgcacggtcagagcgagtgggag
cggctgaccggcgagattgccagcctcaccccggccctgagcgctcaggaggcgcgcctg
cagacccagcgtgagctgctgcacaagctcgagcgcgactacaaggagcatgaacagcaa
cggcaggggctggtcaccagccgtgccacctgcctggggggcgaggagattgccctggtc
gagagccgctggctgcagcggctgcaacaactggccagcgagctggagacgatgcagggg
gcggcccgcaccctgcgcgagcgccagaccgagctcaagacccgtctcagccatctggag
caggagaagcaggtgagcagccggcggcgacgggaggtgctggggcgctgggctgcccac
gccagcagcctcggcatcgccgaatatgatctgcgccgcctgctggccatgagcccggat
gagctcaaggggcgccgcgccgccttgcaggcgctggaggatgcccgcgccgaggcgcgt
acccgtttgaccgagcggcagcgggcgctggcgctggaggagagcaagcgggatcgttac
cgcgagcatcaccccgagctggccgcgttggcgccccaggaactcgacagccggctgacg
gcgctggaggcgcactgccgcgccctcgacgagcagctgttccagtgcaagagcacgctg
gcacaggcggaggcggcggccctcaaggcgggcaccctgcaggaggaactggccgcccag
cagggggtggcggatcactggcagcggctctgtgaccttatcggttcggccagcggcgcc
aagctgcgtaccttcgcccagagcctcacgctggagcggctgctgctggaggccaacgcc
cagcttgccgagctctcccctcgctatcgactggagcgggtgcccggcaccgatctggcg
ctgcaggtggtggatctcgacatgggggacgaggtgcgctcggtggactccctctccggc
ggcgagagcttcctggtgtcgctggcactggcgctggccctctccagcctgtcgtcgcgc
cagacccaggtcgaatcgctctttatcgatgaggggtttggcaccctggatcccgacagt
ctggatctggcgctctccagtctcgactccctgcaggcggccggccgccagatcggggtc
atctcccacgtgcagaccctggtggagcggatcggcgtgcaggtgcgggtggaggccctc
ggcggcggcgaaagccgggtagtgttgcccggctga
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