Aeromonas sp. ASNIH3: C2U39_16510
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Entry
C2U39_16510 CDS
T05427
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aea
Aeromonas sp. ASNIH3
Pathway
aea03030
DNA replication
aea03430
Mismatch repair
aea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U39_16510
03430 Mismatch repair
C2U39_16510
03440 Homologous recombination
C2U39_16510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aea03032
]
C2U39_16510
03400 DNA repair and recombination proteins [BR:
aea03400
]
C2U39_16510
Enzymes [BR:
aea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U39_16510
DNA replication proteins [BR:
aea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U39_16510
DNA repair and recombination proteins [BR:
aea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U39_16510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AUV14867
LinkDB
All DBs
Position
complement(3526932..3530411)
Genome browser
AA seq
1159 aa
AA seq
DB search
MADPRFIHLRVHSDFSMVDGLQKIGPIVSAAAANNMPALALTDQMNMCGLVRFYGSAHGK
GIKPLVGADFWVQSDELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKAW
LGEHAKGVIVLSGGREGDVGKFLLKGNRQMVEHCLAFYQTHFPDAYYLELLRTGRPDEEV
YLHMAVAIATEFELPVVATNEVVFLTADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMAELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEDFLVMKSKEGL
EERLAFLFPDPAVRAERRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSE
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKKSFALL
QRFETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGKEA
ISYPDEKWQHESLKPILEPTYGIILYQEQVMQIAQTLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIEAILEARDRDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSSELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQRIDERFFPRLCEILEPARAGVCPVQVNYRRPGSRVRLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccccgtttcatccacctgagggtgcactccgacttctccatggtcgacggc
ctgcagaagatcggtcccatcgtctccgcagccgccgccaacaacatgccggccctggcc
ctgacggaccagatgaacatgtgcggcctggtgcgcttctacggctctgcccacggcaag
gggatcaagcccctggtcggggcggatttctgggtgcagagcgacgagcttggggacgag
cagtttcgcctcaccctgctcgccatggacaacgacggctaccagaacatcaccctgctc
atctcccgcggctatcagcgcggtcatgtgcaggggcgccccgtcatcgacaaggcctgg
cttggcgaacatgccaagggggtgatcgtcctctccggcgggcgcgagggggatgtgggc
aagttcctgctcaaaggcaaccgccagatggtggagcattgcctcgccttctaccagacc
cacttcccggatgcctactaccttgagctgctgcgtaccggccgcccggacgaggaggtc
tacctgcacatggcggtggccattgccaccgagttcgaactgccggtggtggccaccaac
gaggtggtgttcctcaccgccgatgacttcgatgcccacgagatccgggtcgccatccac
gacggctacaccctgatggacaagcgccgaccgcgccgctacagcccccagcagtacctg
cgcagtcaggaggagatggcggagctgtttgccgacatcccggaagccctggaaaacacg
gtggagatcgccaagcgctgcaacgtgacggtgcgccttggcgagtatttcctgcccaac
ttccccaccggcgacatgaccaccgaagacttcctggtcatgaagtcgaaggaagggctg
gaggagcggctggccttcctgttcccggatccggcggtgcgggccgagcgccgtcccgag
tatgacgagcgtctcgacatcgagctcaaagtgatcaaccagatgggcttcccgggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcatccccgtcggtccg
ggccggggctcgggggcggggtcgctggtggcttatgccctcaagatcaccgatctcgat
ccgctggaatttgacctgctgttcgaacgtttcctgaaccccgagcgggtctccatgccc
gacttcgacgtcgacttctgcatggacaggcgcgacgaggtgatcgatcacgtctccgag
atgtacggccgggaggcggtatcccagatcatcaccttcggcagcatggcggccaaggcg
gtggtacgggacgtcggccgggtgctgggccacgcctacggctttgtcgatcgcatctcc
aagctgatcccgcccgaccccggcatgaccctcgccaaggcgttcgaggccgaacccaag
ctgcccgagctctacgagcaggacgaggaggtcaaggacctcatcgacatggcccgccgc
ctggaaggggtggtgcgcaacgccggcaagcacgccggtggcgtggtgatcgcgcccacc
aagatcaccgacttcgcgccgctctattgcgacgacgaggggcatcacccggtcacccag
ttcgacaagaacgacgtggagtacgcgggcctagtgaagttcgacttcctggggctgcgc
accctcaccatcatcgattgggcccttggcatgataaacccccgtcttgccaaagagggc
aagccgccggtggacatcgccgccatccccatcgatgacaagaagtcgttcgccctcttg
cagcgtttcgagaccacggcggtgttccagctcgaatcccgcggcatgaaggacctcatc
aagcggctgcagcccgactgcttcgaagacatgatcgcgctggtggccctgttccgtccg
ggcccgctccagtcgggcatggtggacaacttcatcgagcgcaagcacggcaaggaggcc
atctcctacccggacgagaagtggcagcacgaaagcctcaaacccatactcgagcccacc
tacggcatcatcctctaccaggagcaggtgatgcagatcgcccagaccctggcggggtat
accctgggtggcgcggacatgctgcgccgggccatgggcaagaaaaaacccgaagagatg
gccaagcagcgggcgggcttcgaggagggggcggtcaagaacggcgtcgacggcgaactg
gcgatgaagatcttcgatctggtggagaagtttgcgggctacggcttcaacaagtcccac
tccgctgcctatgcgctggtctcctaccagaccctctggctcaagacccatttcccggcg
gagttcatggcggcggtgatgaccgcggacatggacaacaccgacaagatagtgaccctg
gtggacgagtgtcagcgcatggggctgaccgtgataccgccggacgtcaacaccggtcgc
taccgcttcagcgtcaacgaggacggccatatcgtctacggcatcggcgcggtgaaggga
gtaggggaagggcccatcgaggcgatcctggaggcgcgggatcgggacggtccgttccgc
gacctgttcgacttctgcaaccgggtcgacatcaagaagctcaacaagcgggtgatggag
aagctcatcctctccggcgccatggacaggctcggcccccaccgcgccgccctgatggcg
accctggaggaggcgatgcgcgccgccgagcagcacgccaaggcccaggcggtggggcag
gtcgacatgttcggcgtgctcacggaggagatcgacgacgtcaagaaggcgttcgccaac
gtgccgcactggcccgacaaggtgtggctggaaggggagcgcgagaccctcgggctctac
ctcaccggtcaccccatcaaccagtacagcagcgagctgcggcgctacacctcgggccga
ctgtgcgatctgcatcccacctcccgggatacggtgaccacggcggcggggttggtgatc
gcggcgcgcagcatggtgaccaagcgcggcaacaagatggggatcttcaccctggacgac
agatccggccgtctggatgtgacccttttcagtgaagcgctggaaaaatacgaagaattg
atgcaaaaagaccgtattttagtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgcgagttgctggatatcaacgatgcgagggagcgttttgcc
agggcaatccgcatctccctcgatgaacaacgcattgacgagcgctttttcccgcgtttg
tgcgagattttggagcccgcccgtgccggagtctgtccggttcaggtaaactatcgtcgc
cccggttcccgggtgcgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgagtcctgcttggacgagagcgggttgaattggtttttgattag
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