Aeromonas sp. ASNIH3: C2U39_19445
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Entry
C2U39_19445 CDS
T05427
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
aea
Aeromonas sp. ASNIH3
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aea03009
]
C2U39_19445
Enzymes [BR:
aea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C2U39_19445
Ribosome biogenesis [BR:
aea03009
]
Prokaryotic type
rRNA helicases
C2U39_19445
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUV14125
LinkDB
All DBs
Position
complement(4146036..4147256)
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AA seq
406 aa
AA seq
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MSQSFDDFDLNPALSRALAEMGFTRPTTIQQMVLEPALDGRDILASAPTGTGKTAAFLLP
AMQHLLDFPRRKPGPCRMLILTPTRELALQVSAHAKALAVHTHLSIETIIGGVSHEEQLP
ALTKTTDIVVATPGRLLEYIEKEEFESHDIEVLVLDEADRMLDMGFIKDVNRIVEEARYR
KHTMLFSATLEGAGLEKFASEILKDPVELHAEPPRSERRPITQWIHLADDAAHKLALLVH
ILKNPETQKAIIFVKTRERLAELSGQLQAAGVPCAWIRGEMEQAKRIESIRKFHEGEVPF
LIATDVAARGIDLPNVSHVINYDMPYGADVYVHRIGRTGRAGNRGCAISLVEAHDMAMVA
KIERYTEERLKRRVIDELRPRHKEARVPVKKKKPKDAKKSAKKKKK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcctttgatgatttcgacctgaatccagccctcagtcgggccttggccgag
atgggattcacccgccccaccaccatccagcagatggtactggagccagccctggacggc
cgcgatattctggcctctgcgccgaccggaaccggcaagaccgccgccttcctgctgccc
gcgatgcagcacctgctggacttcccgcgccgcaagccgggtccgtgccgcatgctgatc
ctgactccgacccgcgagctcgcgctgcaggtgagtgctcacgccaaggccctggcggtg
cacacccatctcagcatcgagaccatcatcggtggcgtcagccatgaagagcagctgcct
gccctgaccaagaccaccgacatcgtggtggccaccccgggccgtctgctcgagtacatc
gagaaagaggagttcgagagccacgacatcgaggtgctggtgttggatgaagcggaccgg
atgctggacatgggcttcatcaaggacgtgaaccgcatcgtggaagaggcgcgctaccgc
aagcacaccatgctcttctccgccactctggaaggggccggcctcgagaagtttgcgagc
gagatcctcaaagacccggttgagctgcacgccgagccgccccgcagcgagcgccgcccc
atcacccagtggatccacctggccgatgatgccgcccacaagttggctctgctggtgcac
atcctgaaaaacccggagacccagaaggccatcatcttcgtcaagacccgtgagcgactg
gcggagctttccggccagttgcaggcggcaggcgtgccctgcgcctggatccgtggcgag
atggagcaggccaagcgcattgagtctatccgcaagttccatgaaggggaggtgcccttc
ctaatcgccaccgacgtggccgcccgcggcatcgacctgccgaacgtcagccatgtcatc
aactacgacatgccctacggcgcggatgtctatgtgcaccgcatcggtcgtaccggtcga
gccggcaaccgtggctgcgccatcagcctggtggaagctcacgacatggccatggtcgcc
aagatcgaacgctacacagaggagcgcctcaagcgccgggtgatcgatgagctgcgcccc
agacacaaggaagcgcgggtgccggtgaagaagaaaaagccgaaggatgccaagaagtcg
gcaaagaagaaaaagaagtaa
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