Aeromonas sp. ASNIH3: C2U39_22405
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Entry
C2U39_22405 CDS
T05427
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
aea
Aeromonas sp. ASNIH3
Pathway
aea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C2U39_22405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aea03021
]
C2U39_22405
03400 DNA repair and recombination proteins [BR:
aea03400
]
C2U39_22405
Enzymes [BR:
aea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C2U39_22405
Transcription machinery [BR:
aea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C2U39_22405
DNA repair and recombination proteins [BR:
aea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C2U39_22405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AUV14615
LinkDB
All DBs
Position
complement(4752034..4752309)
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVEDAVKQVGNRFDLVLVAARRARQIAVQGKDPLVDEENDKPTVIALREIELGLVN
NQVMDTQDRYEQQEQEAAELAAVAAIAEGRG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttactgtagaagatgctgtaaaacaggtaggtaaccgttttgacctggtg
ctggtcgccgcgcgccgcgctcgtcaaatcgcggtacaaggcaaggatcccctggtcgac
gaagagaacgacaagccgaccgtgatcgccctgcgcgagatcgaactgggtctggtcaac
aaccaggtgatggatactcaggaccgctacgagcagcaagagcaggaagccgccgagctg
gctgccgttgctgccatcgcagaaggtcgcggctaa
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