Aeromonas sp. ASNIH3: C2U39_22870
Help
Entry
C2U39_22870 CDS
T05427
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aea
Aeromonas sp. ASNIH3
Pathway
aea03030
DNA replication
aea03430
Mismatch repair
aea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U39_22870
03430 Mismatch repair
C2U39_22870
03440 Homologous recombination
C2U39_22870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aea03032
]
C2U39_22870
03400 DNA repair and recombination proteins [BR:
aea03400
]
C2U39_22870
Enzymes [BR:
aea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U39_22870
DNA replication proteins [BR:
aea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U39_22870
DNA repair and recombination proteins [BR:
aea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U39_22870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AUV14992
LinkDB
All DBs
Position
pKPC-cd17:complement(22476..23303)
Genome browser
AA seq
275 aa
AA seq
DB search
MPKTRKHLTPTEAEAKGLLCRKHLKERLRLMPGLNTKPAGSVWQGQGAYDVYNPAECVPW
RWMPGRAQVRRQHVAAQAKDLIAAGCIVLDTETTGLGDDAEICEITILDVTGAPILDTLV
RPTRPIPVEATAIHKITDAMVASAPSWPEVAEQYAAAVAGRTVVAYNVAFDARLLRQTYQ
IHGITAPVLTTACAMLMYAEWHGEYDRSRDRWRWLKLIEAATDCGVAEDGAHRALADARM
TLGVLRYLQRRTNGRRPAGPKVATVPQEALPSVLG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaacccgaaaacacctcaccccgaccgaagcagaggccaaggggcttctatgc
cgtaagcacctcaaggaacgcctccgcctcatgccgggactaaacaccaagcccgctggc
agtgtctggcaaggtcagggggcttatgatgtgtacaacccagccgagtgcgtgccgtgg
cgctggatgcctgggcgtgcccaagtccgtcgccagcacgtcgcagcgcaggcaaaagac
ctgatcgccgcaggctgcattgtgctcgacaccgaaaccaccggcctcggtgatgacgcc
gagatttgcgagataaccatactcgacgtgaccggcgcaccgatcctcgacacgctggta
cgcccgacccggccaatcccggtcgaggcgacagcgattcacaaaatcaccgacgccatg
gtggccagtgcgccgagctggcccgaggtggccgagcagtacgccgccgccgttgctggc
cgaaccgtcgttgcctacaacgtcgcttttgatgcgcgcttgctgcggcagacctatcag
atacacggaatcaccgcgccagtgttgacgaccgcttgcgcgatgctgatgtatgccgag
tggcatggagagtacgaccggagccgcgaccgctggcgatggttgaagctgatcgaggct
gcgaccgactgcggcgtggcagaagacggcgcacaccgcgcccttgccgacgcccgcatg
acgctgggtgtgctgcgatacttgcagcgccgcacgaacggacggcgaccggcagggccg
aaagtggccaccgtcccgcaggaggctttgccctctgttttaggatga
DBGET
integrated database retrieval system
