Aeromicrobium sp. A1-2: C6I20_01650
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Entry
C6I20_01650 CDS
T05642
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aeb
Aeromicrobium sp. A1-2
Pathway
aeb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aeb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C6I20_01650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aeb03021
]
C6I20_01650
03400 DNA repair and recombination proteins [BR:
aeb03400
]
C6I20_01650
Enzymes [BR:
aeb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C6I20_01650
Transcription machinery [BR:
aeb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C6I20_01650
DNA repair and recombination proteins [BR:
aeb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C6I20_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
DUF5441
Motif
Other DBs
NCBI-ProteinID:
AXT84024
UniProt:
A0A3B7D861
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All DBs
Position
332875..333885
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AA seq
336 aa
AA seq
DB search
MLIAQRPALSEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFSTVPGVTEDVTEIILNLKELVVSSENDEPVVMYLRKDGAGEVTAADIQPPAGVEVHN
PDLHIATLNAKGKIEIELVVERGRGYVSAVQNKSGDEEIGRMPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVIDVETKKSMLPRDAIASAGSTLVELFGLARELNVEAEGIDIGPSPVD
EQLAADLALPIEDLNFTVRSYNCLKREGIHTVGELITRSEQDLLDIRNFGSKSIDEVKAK
LAEMGLALKDSPAGFDPSAVIDAYDDDASFAEDEQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgcccagcgccccgccctgtccgaagaggtcgtcgacgaattccgttcgcgg
ttcgtcatcgagcctctggagcccggcttcggctacaccctcggcaactcgctgcgtcgt
acgctgctgtcgtcgatcccgggtgcggccgtcacgtcgatcaagatcgacggtgtcctg
cacgagttctcgaccgtccccggcgtgaccgaggacgtcaccgagatcatcctgaacctc
aaggagctcgtggtctcctcggagaacgacgagcccgtcgtcatgtacctccgcaaggat
ggtgcgggcgaggtgaccgcagccgacatccagcccccggccggagtcgaggtccacaac
ccggacctgcacatcgccacgctcaacgccaagggcaagatcgagatcgagctcgttgtc
gagcgcggccgcggttacgtctcggcggttcagaacaagtccggcgacgaagagatcggc
cgcatgccggtcgactcgatctactcgccggtcctgaaggtgacctacaaggtcgaggca
actcgagtcgagcagcgcaccgacttcgacaagctcgtcatcgacgtcgagaccaagaag
tcgatgctgccgcgtgacgcgatcgcgtcggccggttccaccctggtggagctgttcggt
ctggctcgtgagctcaacgtcgaggccgagggcatcgacatcggtccgtcgccggtcgac
gagcagctcgctgccgacctggctctgccgatcgaggacctcaacttcacggtccgttcg
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcatcacgcgctcggag
caggacctgctcgacattcgcaacttcggttcgaagtcgatcgacgaggtcaaggccaag
ctcgccgagatgggcctcgcgctgaaggacagccccgctggtttcgacccgtcggccgtc
atcgatgcgtatgacgacgacgccagcttcgccgaggacgagcagtactga
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