Aeromicrobium sp. A1-2: C6I20_05775
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Entry
C6I20_05775 CDS
T05642
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aeb
Aeromicrobium sp. A1-2
Pathway
aeb03030
DNA replication
aeb03430
Mismatch repair
aeb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aeb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6I20_05775
03430 Mismatch repair
C6I20_05775
03440 Homologous recombination
C6I20_05775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aeb03032
]
C6I20_05775
03400 DNA repair and recombination proteins [BR:
aeb03400
]
C6I20_05775
Enzymes [BR:
aeb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6I20_05775
DNA replication proteins [BR:
aeb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C6I20_05775
DNA repair and recombination proteins [BR:
aeb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C6I20_05775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AXT84751
UniProt:
A0A3B7D4K7
LinkDB
All DBs
Position
1173719..1177255
Genome browser
AA seq
1178 aa
AA seq
DB search
MSSDSPFVHLHVHTEYSMLDGAALLDGLFDRTSELGMPAIAMTDHGNLHGAFDFYSKAKA
HGVKPIIGMEAYLTPNIPRTEKKAVQWNKGAKDADVAGRGAYTHMTLLSETTEGMHNLFR
IGSYASLEGQYRKPRADRDLLQRFGKGLIATTGCPSGEIQTWLRIGNYEKARASAAEFQD
IFGKENFFLELMDHGLAIETQVRDGLLRLMKDLDLPPIATNDSHYTAPEDAEAHSALLCV
QSGSTMTDPNRFKFDSNDFYIKSAKEMRDLWEDRFDLKAACDNTLLIAERCEVEFAESNG
GYMARADVPPGETEDSWFTKEVWRGVESRYPGEALTDAVRERTEMELGVVRSKGYCGYYL
VVADFINWAKDNGIRVGPGRGSGAGSIAAYALRITDLCPLTHGLIFERFLNPERPSMPDF
DIDFDERRRGEVIRYVSNKYGEERVAMIATFGRLKSKAAIKDAARVMDYPFTHGERITKA
LPADVMGKGVTLKGLFDKDDKRYGDGADFRKMHDEDADVRKIYQTALGLEGQIRQWGVHA
AGVIMSSDPLIDIVPIMKREQDGAIITQFDYPMCEALGLVKMDFLGLRNLTVLDDTLINI
KRNRDIELVLEDLTFDDPATYDLLARGDTLGVFQLDGGPMRALLRSMKPDKFEDISAVGA
LYRPGPMGADSHNKYARRKNGREPIDPIHPELEKPLETVLGETYGLIVYQEQVMEIAQVL
AGFSLGQADNLRRAMGKKKKSELDKQYAGFQGGMLERGYSQKAITTLWEVLLPFSDYAFN
KAHSAAYGVISYWTAYLKANFPAEYMAALLTSTRGDKDKSAIYLNECRRMGIKVLPPDVN
ESVSNFASVGADIRFGLGAIRNIGENVVAGVVEGRTNNGPYTDFNDFLDKVPTLVCNKRV
LDSLIKAGAFDSMGHRRRALTTVAEEGVDLYIDLKRQAAIGQDSLFGGADDAFTGGKVEV
PVSMPEWEKTQLLAFERDMLGLYVSDHPLQGLEHVLRASSDSTVGELLTNTDIPDGTTIR
ICGLITGVQRRMSKKGDSWASITIEDLEGGIEVMVFPGAYQLAVPVLIPDTIVVVKGRVR
RKDDGIELNALEVTMPAMSTGGPDRPLVVSLPVARCTADTIGTFKQVLATHPGVSEVHLR
LIGNGSTKVMRLDDSHRVAQSSSLIADLKELLGPHCLS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgactcaccattcgtgcacttgcacgtgcacacggagtactcgatgctcgat
ggtgcggccctgcttgacgggctcttcgaccggacctctgagctcggcatgcctgccatt
gcgatgaccgatcacggcaacctgcacggcgccttcgacttctacagcaaggccaaggcg
cacggggtcaagccgatcatcggcatggaggcctacctcacgcccaacatccctcgcacc
gagaagaaggccgtgcagtggaacaagggcgccaaggatgccgatgtggccgggcggggt
gcctacacccacatgacgctgctgtcggagacgaccgagggcatgcacaacctgttccgt
atcggctcctatgcgagcctcgaggggcagtaccgcaagccgcgtgccgaccgtgacctg
ctgcagcgattcggcaaggggctcatcgcgacgacgggctgcccgtccggcgagatccag
acctggctgcgcatcggcaactacgagaaggcgcgggcttcggccgccgagttccaggac
atcttcggcaaggaaaacttcttcctcgagctgatggaccacgggctcgcgatcgagacg
caggtccgcgatggcctgttgcggctcatgaaggatctcgacctgccaccgatcgcgacc
aacgactcgcactacaccgcccccgaggacgccgaggcgcactcggcactgctgtgcgtg
cagtcgggcagcaccatgaccgaccccaaccggttcaagttcgactccaacgacttctac
atcaagtcggccaaggagatgcgtgacctgtgggaggaccgattcgacctcaaggccgcc
tgcgacaacacgctgctgatcgcggagcgttgcgaggtcgagttcgccgagtccaacggc
ggatacatggcccgcgccgacgtccccccgggcgagaccgaggactcctggttcaccaag
gaggtctggcgaggcgtcgagtcccgatacccgggtgaggcgttgaccgacgcggtgcgc
gagcggaccgagatggagctcggcgtcgtccggagcaagggctactgcggctactacctc
gtggtcgccgacttcatcaactgggccaaggacaacggcatccgggtcgggccggggcgt
ggctcgggagccgggtcgatcgcggcgtacgcgctgcgcatcacggacctgtgccccctg
acacacggcctgatcttcgagcgtttcctcaaccccgaacgtccgtcgatgcccgacttc
gacatcgacttcgacgagcgtcgacgcggcgaggtcatccgctacgtcagcaacaagtac
ggcgaggagcgggtcgcgatgatcgcgaccttcggccggctcaagtccaaggccgcgatc
aaggacgccgcgcgggtcatggactacccgttcacccacggcgagcgcatcaccaaggcg
ctgccggccgacgtcatgggcaagggcgtcacgctcaagggcctgttcgacaaggacgac
aagcgctacggcgacggcgccgacttccgcaagatgcatgacgaggacgccgacgtccgc
aagatctaccagaccgccctggggctcgagggccagatccggcagtggggtgtgcacgcg
gctggcgtcatcatgtcgagcgacccgttgatcgacatcgtcccgatcatgaagcgcgag
caggacggcgcgatcatcacgcagttcgactacccgatgtgcgaggcgctcgggctggtc
aagatggacttcctcggcctgcgcaacctcacggtgctcgatgacaccttgatcaacatc
aagcgcaaccgggacatcgagctggtcctggaggatctgacgttcgacgatccggcgacg
tacgacctgctggcgcgcggcgacaccctcggggtgttccagctcgacggtggcccgatg
cgggccctgctgcgcagcatgaagcccgacaagttcgaggacatctcggccgtcggcgcg
ctctatcgcccggggcccatgggtgcggactcgcacaacaagtacgcccggcgcaagaac
ggccgcgagccgatcgacccgatccaccccgagctggagaagccgctggagacggtgctg
ggggagacctacggcctgatcgtctaccaggagcaggtcatggagatcgcccaggtgctg
gccgggttctcactcggacaggctgacaacctgcggcgcgcgatgggcaagaagaagaag
tccgagctcgacaagcagtacgccgggttccagggcggcatgctcgagcgcggctattcg
caaaaggccatcacgacactgtgggaagttctgctcccgttctcggactacgccttcaac
aaggcgcactccgctgcctatggcgtcatctcctactggacggcctacctcaaggccaac
ttcccggccgagtacatggctgcgctgctgaccagcacccgcggtgacaaggacaaatcg
gcgatctacctcaacgagtgccgacgaatgggcatcaaggtgctgccgccggacgtcaac
gagtcggtctccaacttcgcctcggtcggagccgacatccgcttcggactcggtgcgatc
cgcaacatcggtgagaacgtcgtggccggcgtcgtggaggggcgcaccaacaatggccct
tacaccgacttcaacgacttcctcgacaaggtgccgacgctggtgtgcaacaagcgggtg
ctcgactccttgatcaaggccggcgccttcgactcgatgggtcaccgccgtcgagcgctg
acgacggtcgccgaggagggcgtcgatctctacatcgacctcaagcggcaggccgcgatc
gggcaggactcgctgttcggaggcgcggacgacgcgttcaccggcggcaaggtcgaggtg
cccgtgtcgatgcccgagtgggagaagacccagctgctggcgttcgaacgcgacatgctg
ggcctgtacgtctcggaccaccccctgcagggactcgagcacgtgctccgcgcgagcagc
gacagcacggtcggcgagctgctcaccaacaccgacatccccgacggcaccacgatccgc
atctgcgggctcatcaccggcgtgcagcgccggatgagcaaaaagggcgacagctgggcc
tcgatcacgatcgaggacctcgagggcggcatcgaggtcatggtcttcccgggggcctat
cagctcgcggtgccggtcctgattcccgacacgatcgtcgtggtcaagggccgggtccgc
cgcaaggacgacggcatcgagctcaatgcgctcgaggtcacgatgccggccatgagcacg
gggggcccagatcgcccgctggtcgtgagcctgcccgtggctcgctgtacggcagacacg
atcggcacgttcaagcaggtcctggccacccacccgggtgtctccgaggtgcacctacga
ctgatcggcaatggatcgaccaaggtcatgcgactcgacgacagccaccgtgtggcacag
tcgtcctcgctgatcgccgacctgaaagagctgttgggcccacattgcctctcctga
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