Aeromicrobium sp. A1-2: C6I20_05950
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Entry
C6I20_05950 CDS
T05642
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aeb
Aeromicrobium sp. A1-2
Pathway
aeb03030
DNA replication
aeb03410
Base excision repair
aeb03420
Nucleotide excision repair
aeb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aeb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6I20_05950
03410 Base excision repair
C6I20_05950
03420 Nucleotide excision repair
C6I20_05950
03440 Homologous recombination
C6I20_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aeb03032
]
C6I20_05950
03400 DNA repair and recombination proteins [BR:
aeb03400
]
C6I20_05950
Enzymes [BR:
aeb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6I20_05950
DNA replication proteins [BR:
aeb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C6I20_05950
DNA repair and recombination proteins [BR:
aeb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C6I20_05950
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6I20_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
AXT84780
UniProt:
A0A3B7D319
LinkDB
All DBs
Position
1211152..1213815
Genome browser
AA seq
887 aa
AA seq
DB search
MDRLLLIDGHSVAYRAFFALPVENFSTTTGQSTNAVFGFTSMLINVLRDEKPTHVAVAFD
VSRQTFRLEQYPEYKGNRAKSPPEFTGQIPLIKQILDALHIVTFEKDGFEADDIIGTLAT
RAESAGMDVLICTGDRDALQLVTDKTTVLYPRKGVSDLARMTPTAVQEKYGVAPVNYPDI
AAMVGETSDNLPGVPGVGPKTAAKWLGQFGSLDEIISKVDQIPGKAGESMRAHLDDVIRN
RSINALIRDLDLPAGPADLAFDTVWDREAIHAVFDALEFNALRVRLFEAFGAVEPQAEEG
FDLEGATLAPGEISTWLAAQSASGARLGLHVQGSWGRGTGDVVGLGIASEESAAWIDTDD
ITPEDDAAITAWLADPDRPKVLHDAKGPMLALHAKGWPLRGVAADTALSAYVVRPDQRSY
DLGDLSLRYLKRELRDESDHAGQLTLETDNLGAESGMLRARATLDLAVVLDEEVEQASGT
ALIADVELPLVATLARMERTGIAIDDDHLIALESEFAARAQNAASEAFAAIGGKEINLGS
PKQLQVVLFDELGMPKTKKTKTGYTTDADALQQLYAKTEHPFLQHLLDHRDVTRLRQTVE
GLRKSISDDGRIHTTYAQTIAATGRLSSNDPNLQNIPIRTASGRRIREAFCVGAGFDTLV
TADYSQIEMRIMAHLSEDADLIAAFNSGEDFHTVMAAKVFSKDPGDIDGELRARIKAMNY
GLAYGLSSYGLSQQLNITTGEAQGLMDDYFERFGGVRDYLRGLVDEARQTGFTETIMGRR
RYLPDLQSDNRQRREMAERMALNAPIQGSAADIIKVAMLGVERALDAAGLTSRMLLQVHD
ELVLEVVAGEREQVEQLVRDQMASAADLSVPLDVSVGVGRTWHEAGH
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
gtggaccgcctcctgctgatcgacggtcattccgtcgcctatcgcgccttctttgccctc
cctgtggagaacttctcgaccacgacgggccagagcaccaatgcggtgttcggcttcacg
tcgatgctgatcaacgtgctgcgtgacgagaagccgacgcatgtcgcggtcgccttcgac
gtctcccgccagacgttccggctcgagcagtaccccgagtacaagggcaaccgggccaag
tccccgccggagttcacgggtcagatcccgctgatcaagcagatcctcgacgccctgcac
atcgtgacgttcgagaaggacggcttcgaggccgatgacatcatcggcacgctggcgacc
cgcgccgagtctgccgggatggacgtgctgatctgcaccggcgaccgcgacgcactgcag
ctcgtgactgacaagacgacggtgctctacccccgcaagggagtctcggacctcgcgagg
atgacgcccacggcggtccaggaaaaatatggcgtcgcgccggtcaactatcccgacatc
gccgcgatggtcggcgaaaccagcgacaacctgccgggcgttccgggcgtgggccccaag
accgcggccaaatggctggggcagttcggctcgctcgacgagatcatctccaaggtcgac
cagatcccgggcaaggcgggcgagtcgatgcgcgcccacctcgacgacgtcatccgcaac
cgcagcatcaacgcgctgatccgcgatctcgaccttcccgcaggacctgccgacctggcc
ttcgacacggtctgggaccgcgaggcgatccacgcggtcttcgacgcgctggagttcaac
gcgctgcgggtccggctcttcgaggcgttcggcgccgtcgagccgcaggccgaggagggc
ttcgacctcgagggcgccacgctggcgcccggtgagatctcgacctggctcgcagcccag
tcggcctccggcgcccgcctgggcctgcacgtgcagggatcctgggggcgcggcacgggt
gatgtcgtcggactggggatcgcctcggaggagtcggctgcgtggatcgacactgacgac
atcacgcccgaggacgatgccgcgatcaccgcgtggctggccgatcctgaccggcccaaa
gtcctgcacgacgccaagggcccgatgctggccctccacgccaagggttggcctttgcgc
ggcgtcgcggccgacacggccctgtcggcgtacgtcgtccgacctgaccagcgctcctac
gatcttggcgacctgtcgctgcgctacctcaagcgcgagctgcgcgacgagtccgaccat
gccggccagctgaccctcgagaccgacaacctcggtgccgagtcgggcatgctgcgtgcc
cgcgcgacgctcgacctggcggtcgtgctcgacgaggaggtcgagcaggccagcggcacg
gcgctgatcgccgatgtcgagctgcccctcgtggcgacgctcgcccggatggagcgcacc
ggcatcgcgatcgacgacgaccacctgatcgcgctggagtccgagttcgcggcacgcgcc
cagaacgccgcctcggaggcattcgcggcgatcggcggcaaggagatcaatctcggctcg
cccaagcagctgcaggttgtgctgttcgacgagctcggtatgcccaagaccaagaagacc
aagacgggctacacgaccgacgcagacgcactgcaacagctctatgccaagaccgagcac
cctttcctgcagcacctgctcgaccaccgcgacgtgaccaggctccggcagaccgtcgag
gggctgcgcaagtcgatctccgacgacggccgcatccacacgacctacgcccagacgatc
gctgcgacggggcgtctgagctccaacgaccccaacctgcagaacatcccgatccgcacg
gcctcgggtagacgcatccgtgaggcgttctgcgtcggagcgggcttcgacacgctcgtc
acggccgactacagccagatcgagatgcgcatcatggcgcacctgtcggaggatgccgac
ctgatcgcggcgttcaactcgggcgaggacttccacacggtcatggcggccaaggtcttc
tccaaggatcccggcgacatcgacggcgagctgcgggcccggatcaaggcgatgaactac
ggcttggcctacgggctgtcgtcctatggtctgagtcagcagctcaacatcacgaccggc
gaggcgcagggcctgatggacgactacttcgagcgattcggtggcgtgcgcgactatctc
cgcggactggtcgacgaggctcggcagaccggcttcaccgagaccatcatgggccggcgg
cgctacctgccagatctgcagagcgacaaccggcagcgccgtgagatggccgagcggatg
gccctcaacgcgcccatccagggttcggccgccgacatcatcaaggtcgcgatgctcggc
gtcgagcgggcgctcgacgccgctggcctgacctcacggatgctgctgcaggtgcacgac
gagctcgtgctcgaggtcgtcgcgggggagcgggagcaggtcgagcagctggtccgtgac
cagatggcgtcggccgccgacctctcggtgccgctggacgtgtcggtcggcgtgggccgc
acctggcacgaagccggccactga
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